Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0071 ATGGGAAACAGTGAGGAAGGGAAATCAACTAAAACTGAAAAACCTTCTTCACCTGTAGCAGTGGACCAGGCTAATCAGGGCAGCCAGACCAACATTCATGTCTATCCTGATTGGGCAGCCATGCAGGCATATTATGGGCCAAGAGTCTCCATGCCTCCATACTATAACACAGCTGTGAGTTCTGGTCACCCTCACCCATACATGTGGCCACCACAGCCTATGATGCCACCACCATATGGGACTCCTTACGCAGCAATTTATTCACATGGGGGGGTTTATCCTCACCCTGCAATTCCTATAGCACCACAATCACATGGTCAAGGTGTTCCAACCTCACCTGCAGCTGTAACTCCTTTGAACATGGAGGCACCAACGAAATCTTCTGGAAACAGTGATCAGGGTTTAATGAAGAAACTGAAGGGGTTTAATGGGCTAGCAATGTCTATTGGAAATGGCAATGCTGAAAGTGCTGACCGTGGAGGAGAAAACAGGCTGTCACAGAGTTTGGATACTGAGAGTTACAGTGATAGAAGTGACAGCAACACTGCAGGGGCTAATCAAGCAAGAAGGAAAAGAAGCCGTGAGGGAACACCAGGTACTGATGGAGATGGCAAAACTGGTAGACAAGCAAATCCAGTTTCCAAAGGAGCTGGAGCCTCCAATAAGATGGCATCAATTGCCCCTGCTAATGTTGTGGGAACAGTTGTGGGAACAGTTGTTGGACCTGTAATTTCTTCTGGTATGACAACAGCGTTGGAGCTGAGGAAAACGGATTCCCCGAGTAATCCACAGCCTTGTGCAGTAGTGCAACCTGAAGCTTGGATACAGAATGAACGTGAGCTGAAACGGGAGAAGAGAAAGCAATCAAATCGGGAATCTGCTAGACGGTCCCGGTTAAGAAAGCAGGCTGAGACTGAAGAACTTGCCCGCAAAGTTGAATCCTTGATATCTGAGAATATCACACTGAAATCAGAAATAAACCGATTGACCGAAAGTTCAGGAAAGCTTAAGATGGAAAATGAGACATTAATGGATAAACTGAAAAATGCTCGAGGAGAAAAGGATGAAATCATTTTGACACCGAGTACAGAAAATTTGCTATCCAGGGTTAACAATTCCAATTCTTGTGACAGTAGAACTATAGAGGGTGAGAACGCTTTATGTGAGAAGAAGCCAAACTCAGGAGGAGCAAAGTTGCATCAACTATTGGACACTAGTCCTAGAACTGATGCCGTGGCAGCTGGCTGA 1248 0.4575 MGNSEEGKSTKTEKPSSPVAVDQANQGSQTNIHVYPDWAAMQAYYGPRVSMPPYYNTAVSSGHPHPYMWPPQPMMPPPYGTPYAAIYSHGGVYPHPAIPIAPQSHGQGVPTSPAAVTPLNMEAPTKSSGNSDQGLMKKLKGFNGLAMSIGNGNAESADRGGENRLSQSLDTESYSDRSDSNTAGANQARRKRSREGTPGTDGDGKTGRQANPVSKGAGASNKMASIAPANVVGTVVGTVVGPVISSGMTTALELRKTDSPSNPQPCAVVQPEAWIQNERELKREKRKQSNRESARRSRLRKQAETEELARKVESLISENITLKSEINRLTESSGKLKMENETLMDKLKNARGEKDEIILTPSTENLLSRVNNSNSCDSRTIEGENALCEKKPNSGGAKLHQLLDTSPRTDAVAAG 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0071 415 SUPERFAMILY Leucine zipper domain 281 337 IPR046347 GO:0003700|GO:0006355
Lele40g0071 415 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 285 300 IPR004827 GO:0003700|GO:0006355
Lele40g0071 415 Coils Coil 312 332 - -
Lele40g0071 415 SMART brlzneu 278 342 IPR004827 GO:0003700|GO:0006355
Lele40g0071 415 MobiDBLite consensus disorder prediction 388 415 - -
Lele40g0071 415 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 387 IPR044827 GO:0003700|GO:0006355|GO:0043565
Lele40g0071 415 MobiDBLite consensus disorder prediction 160 187 - -
Lele40g0071 415 MobiDBLite consensus disorder prediction 13 31 - -
Lele40g0071 415 Pfam G-box binding protein MFMR 1 99 IPR012900 -
Lele40g0071 415 MobiDBLite consensus disorder prediction 153 220 - -
Lele40g0071 415 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 280 343 IPR004827 GO:0003700|GO:0006355
Lele40g0071 415 CDD bZIP_plant_GBF1 283 331 IPR045314 GO:0003700|GO:0006355
Lele40g0071 415 Pfam bZIP transcription factor 278 341 IPR004827 GO:0003700|GO:0006355
Lele40g0071 415 Pfam Disordered region downstream of MFMR 132 260 - -
Lele40g0071 415 MobiDBLite consensus disorder prediction 279 304 - -
Lele40g0071 415 MobiDBLite consensus disorder prediction 1 31 - -
Lele40g0071 415 Gene3D - 281 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0071 Lele-ChrLele40 491428 495025 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0071 1 415 bZIP Transcription Factor Family AT2G46270 50.119 2.04e-111 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele40g0071 MFMR_assoc 2.3e-15 No_clan