Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0057 ATGAGGCTAATGACTCATCCATGTCTAGGACTCACATATCAGGCCGAGCAACCGAAGCAGAAGCAACAGACGCGAGCAAAGCTTGAAGCGGGAAGAAACATAAGCAAAACCCAGATAAAATCATCAGCCACACATTTCGCCCCGTCCTTGGCTGCTTCTATATCTCTAATTCCTACTCTTATGGTGTCGGTAAATCCGAACCCAGCTCAAGGCTTCTACTTCTTCGATCCCACCAAGATGGGGCTTCCCGGTGTCAATCCTACGCCCCCACCTCCGGCTACGGCTACGGCTTCTTCCTCCACTTCCACCACCGCCGGCGTCAGTGCCGCTCCTTACGGGGAGGATCTGAGTAAGAAGATCCGAAAACCATACACGATTACCAAGTCCAGGGAGAGCTGGACGGAGCAGGAGCACGACAAGTTTCTCGAAGCTCTCCAATTATTTGACCGTGACTGGAAGAAGATTGAAGCATTTGTTGGCTCAAAAACTGTTATCCAGATACGAAGTCATGCACAAAAGTATTTCCTGAAAGTTCAGAAGAATGGAACAAGTGAACATGTGCCTCCTCCTCGGCCAAAAAGAAAGGCTGCTCATCCATACCCACAAAAGGCACCTAAAAATGCTCCAGTGGTATCCCAAGTTACGATGCCATTGCAATCTTCATCTTCTTTCATTGAGCCCCCATACATTTATAGGCCGGACTCATCATCTGCACTTAGAACTCCAGTTACCAATGTGCCTCTGTCAAATTGGACTTGTAATGTTATCCCTCTAACCAGTGGGCCACAAGTGACTAGAGATGAGATGGGATTGCCTGGGAAAGCTGCTTCTCTAAATTGCTGCTATAGCAGTAGTAATGAGAGCACTCCAAGGGCCTGGCCAGGTAGCAAAGTTATTGATCAAGGGAACTCAGGCAAGCCAATGAAAGTAATGCCAGATTTTGCACAAGTCTACAGCTTTATTGGTAGTGTGTTTGATCCAAATGCATCAAATCACTTGGAGAGGCTGAAACAGATGGACCCAATAAATGTGGAAGCTGTCTTATTATTGATGAGAAACCTCACCATCAATTTAACGAGTCCCAAATTTGAAGATCATAGAAGGTTGCTTTCATCCTACGAGCACAGCTCTTAA 1134 0.4656 MRLMTHPCLGLTYQAEQPKQKQQTRAKLEAGRNISKTQIKSSATHFAPSLAASISLIPTLMVSVNPNPAQGFYFFDPTKMGLPGVNPTPPPPATATASSSTSTTAGVSAAPYGEDLSKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKAAHPYPQKAPKNAPVVSQVTMPLQSSSSFIEPPYIYRPDSSSALRTPVTNVPLSNWTCNVIPLTSGPQVTRDEMGLPGKAASLNCCYSSSNESTPRAWPGSKVIDQGNSGKPMKVMPDFAQVYSFIGSVFDPNASNHLERLKQMDPINVEAVLLLMRNLTINLTSPKFEDHRRLLSSYEHSS 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0057 377 MobiDBLite consensus disorder prediction 84 110 - -
Lele40g0057 377 Pfam Myb-like DNA-binding domain 130 175 IPR001005 -
Lele40g0057 377 ProSiteProfiles SANT domain profile. 128 181 IPR017884 -
Lele40g0057 377 MobiDBLite consensus disorder prediction 180 208 - -
Lele40g0057 377 FunFam protein REVEILLE 6 isoform X1 132 180 - -
Lele40g0057 377 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 125 179 IPR017930 -
Lele40g0057 377 SMART sant 129 177 IPR001005 -
Lele40g0057 377 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 128 177 IPR006447 GO:0003677
Lele40g0057 377 SUPERFAMILY Homeodomain-like 124 180 IPR009057 -
Lele40g0057 377 PANTHER SWI/SNF COMPLEX-RELATED 94 359 - -
Lele40g0057 377 CDD SANT 132 175 IPR001005 -
Lele40g0057 377 Gene3D - 133 180 - -
Lele40g0057 377 ProSiteProfiles Myb-like domain profile. 125 175 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0057 Lele-ChrLele40 387251 394953 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele40g0057 Myb_DNA-binding 3.4e-11 CL0123