Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0054 ATGTCAGTCTATGATGCAGCTTTCGTGGAAACAGAACTCTCCAAAAAGACCTCAATCTTTGGTCTCCGACTATGGCTTGTAATCGGAATCCTCGTCGGTTCTATTATCGTGCTCACTCTCTTCCTGCTCTCGCTCTGCCTCACCTCTCGCCGCCAGAGACGTAAAGAAACCCCTCAAACCAACAAAACCCCTGTCGTTTCGAAGGAAATCCAAGAGATCGTGCCCCTGCCCGCACCCAATCAACACTCAGTCCCCGAGATCCAAGTGGATATCGGGAAAGCGGAGCACCGTGTCGTGGTTTACTCCGATCGGGTCTCTAGTGGAGAGAGCAAGGGAGGTGCCACCAGTGTGTGTGAAACGACGTCCTCTTTTGGTAGTGGGAGTATTGGGCCTGAGGTTTCGCATCTTGGTTGGGGAAGATGGTACACCTTAAGGGAGCTGGAGGCTGCAACTAACAATCTCTGTGAAGAGAATGTTATTGGGGAAGGTGGCTACGGCATCGTTTACCATGGAGTGCTTGGTGATGGTACAAGAGTTGCAGTGAAGAACCTTTTGAATAACAAGGGTCAAGCTGAGAGAGAATTTAAAGTAGAGGTAGAAGCAATTGGTCGTGTGCGCCACAAGAATCTTGTTAGGTTGCTTGGCTACTGTGTTGAGGGGGCATACAGGATGCTTGTGTATGAGTATGTTGATAATGGCAATTTGGAACAGTGGCTTCATGGGGATGTTGGTGCTGTTAGCCCTTTGACATGGGATGTACGGATGACCATTATATTGGGAATTGCGAAGGGATTGGCCTATCTTCATGAGGGTCTTGAACCGAAGGTTGTCCACCGAGATGTGAAATCTAGCAACATACTCCTTAATCGGCAATGGAATGCCAAGGTTTCAGATTTCGGACTGGCTAAACTATTGTGTTCTGAACGGAGTTATGTCAGCACCCGAGTGATGGGGACATTTGGTTATGTTGCTCCAGAATATGCCTGCACTGGTATGTTGACCGAGAAGAGCGATGTTTATAGCTTTGGAATACTTATCATGGAGATAATTTCTGGGAGAAGTCCTGTTGATTATAGTAGACCACAAGGAGAGGTAAATCTAGTAGAGTGGTTGAAGACAATGGTTGGGAATCGAAAATCTGAGGAGGTAGTTGATCCTAAGCTCCCTGAGGTGCCATCTTCAAAGGCTCTTAAGCGTACTCTGTTGGTTGCTCTTCGATGTGTTGATCCTGATTCAACAAAAAGGCCTAAAATGGGACATGTCATCCACATGCTTGATGCAGACGACCTCTTGTTCCGTGATGAACGCCGGATTGAAGGAGAATCTTCGAGCAACTCTCATCGTGATTCGACACAAGAGCATAAGGATTCAAATTCTGATAAAAAGCTTGTAGGCAGAGGTACCACTAATCAACCTCAAGATGATTATAGTAGGAATCCGCATCAACCCAGTAGGTGGAGATAA 1464 0.4679 MSVYDAAFVETELSKKTSIFGLRLWLVIGILVGSIIVLTLFLLSLCLTSRRQRRKETPQTNKTPVVSKEIQEIVPLPAPNQHSVPEIQVDIGKAEHRVVVYSDRVSSGESKGGATSVCETTSSFGSGSIGPEVSHLGWGRWYTLRELEAATNNLCEENVIGEGGYGIVYHGVLGDGTRVAVKNLLNNKGQAEREFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVDNGNLEQWLHGDVGAVSPLTWDVRMTIILGIAKGLAYLHEGLEPKVVHRDVKSSNILLNRQWNAKVSDFGLAKLLCSERSYVSTRVMGTFGYVAPEYACTGMLTEKSDVYSFGILIMEIISGRSPVDYSRPQGEVNLVEWLKTMVGNRKSEEVVDPKLPEVPSSKALKRTLLVALRCVDPDSTKRPKMGHVIHMLDADDLLFRDERRIEGESSSNSHRDSTQEHKDSNSDKKLVGRGTTNQPQDDYSRNPHQPSRWR 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0054 487 CDD STKc_IRAK 160 426 - -
Lele40g0054 487 PANTHER OS01G0323000 PROTEIN 8 456 - -
Lele40g0054 487 ProSitePatterns Serine/Threonine protein kinases active-site signature. 276 288 IPR008271 GO:0004672|GO:0006468
Lele40g0054 487 Gene3D Phosphorylase Kinase; domain 1 136 229 - -
Lele40g0054 487 Pfam Protein tyrosine and serine/threonine kinase 157 425 IPR001245 GO:0004672|GO:0006468
Lele40g0054 487 MobiDBLite consensus disorder prediction 463 487 - -
Lele40g0054 487 ProSiteProfiles Protein kinase domain profile. 154 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0054 487 ProSitePatterns Protein kinases ATP-binding region signature. 160 182 IPR017441 GO:0005524
Lele40g0054 487 SMART serkin_6 154 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0054 487 FunFam Putative receptor-like serine/threonine-protein kinase 230 440 - -
Lele40g0054 487 MobiDBLite consensus disorder prediction 439 462 - -
Lele40g0054 487 MobiDBLite consensus disorder prediction 439 487 - -
Lele40g0054 487 SUPERFAMILY Protein kinase-like (PK-like) 132 425 IPR011009 -
Lele40g0054 487 FunFam Probable serine/threonine-protein kinase At1g01540 134 229 - -
Lele40g0054 487 Gene3D Transferase(Phosphotransferase) domain 1 230 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0054 Lele-ChrLele40 369641 371779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0054 126 425 Receptor kinase-like Gene Family AT4G02010 47.697 1.72e-94 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Lele40g0054 PK_Tyr_Ser-Thr 6.9e-46 CL0016