Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0038 ATGGGGGAATTTGTAGGAGAGCCTAACCCAGGGGTGGTTGAAGAGAAAATCTATGTTGCCGTGTCTAAAGATGTGAAAGAGTGCAAACTAAATCTGATATGGGCGATACAAAATTCTGGGGGAAAGAAGATTTGCATCCTTCACGTCCATGAGCCGGCAACAATGATCCCCTTGATGGGCGCAAATTTTCCAACAAATGCACTGAAAGACCAGGAAGTTGAAGCATATAGGGAAACAGAAATGCAAAACGTGCATAAAATTCTGAATGAGTATCTTCTGATTTGTCAGCGGATGGGGTTGCGAGCAGAGAAACTGCATATTGAACGGGATTGCATTGAGAAAGGAATCGTGGAACTTGTGTCAGAGTATGACATCCGGAAGCTTGTTATGGGAGCAGCATCTGATAAGTCCTATTCTAGGAAAATGATGGACTTGAGATCTAAGAAAGCCATCTACGTACTAGAACAAGCTTCAGCTTCTTGTCATATACAATTTATCTGCAAAGGGCACCTTATATACACAAGGTACAGTAGTTTGGACAAGAGTAAGGGAGAGGCTGCATCTCCGGTCTCACAGCAAAGGTCACAACCTAATGCTGGAAGAGCACCCCACTTGAGATCTCAATCTATTGAACTTGGACGGAATCATTGGGTAAGACTCACAAATCCAGCTCAAGATCTATTCCGAAGAGTGAGGTCTGGCAATGCTAGACATGAAGGGAGCGTGGCAACTATTTCTTCTCCAGATGACACTGAGGGATTGTTAAGTCCACATAGCAGGTTGGGTATAGAAGTGAGTTCTGACGAGTCTGAAGGTCCGTCTGGAAGGAGTCCTTCAGTTGTCTCAACATTCTCTGATAGCAGTGCAGTTGAAGCTGCATCGACCCCAGATTTGATCACTGAGCGGATTGAGAATGTATTAGACTTGAGTGGACAATCTTCAATTAAGGGGGATTTTTCTCATTCATCTACTCCCAGTGTACTGGATGGAGGAATGGACTATAACCTCTATGATCAACTTGAACAAGCCATAGACGAGGCTGAAAATGCTAGGCAGGATGCATACCAAGAAACTGTTAGACGAGGGAAAGATGAAAAACATGCTATTGATACTATACGCAGGGCTAAAGCCTCTGAAATCACATATACAGAGGAGTTGAAAGTGAGGAAAGAGGTAGAGGAAGCATTGGCAAAAACAAAGGAAGAACTTGAACAGATGAAGATCCAAAGAGATAAAGTAAATGAAGAACTCCGGCTTGCCTTAGATCAGAAATCATCACTAGAGAGTCAAATTTCATCATCAGAACTAATGGTAAAGGAGTTGGAGCAGAAGATTATCTCTGCTGTGGGTTTGTTGCAAAGTTTCAAGAAAGAACGTGATGAATTGGAGGTGAAGCGTGATAATGCATTGAGGGAGGCTGAAGAGTTGAGGAAAAAACCAGCTGGGGCCCCAGATACACGTGTGCCTCAATTTTTCTTAGAATTCTCTTTTCCAGAGATTGAAGAAGCAACAGATAGTTTTAATCCATCCCTAAAGATTGGAGAAGGTGGATATGGAAGTATATATAAAGGTATGCTACGTCACACTGAGGTGGCTATCAAAATGTTGAACTCTAACAGTTTGCAAGGGCCTTCAGAGTTTCAAAAGGAGGTTGACATATTGAGTAAGTTAAGGCATCCCAATGTTATTACATTCATTGGAGCCTGTTCGGAATCCTGGGCTCTTGTCTATGAGTATTTACCCAATGGAAGCCTTGAGGATCGGCTCATCTACAAGGATAACACGCCCCCATTATCATGGCAAACTCGAATTCGCATTGCTGCGGAGCTCTGCTCCGCTCTCATCTTTCTTTATTCTAGTAAACCTCACAGCATTGTGCATGGTGACTTAAAACCCTCCAATATACTCCTTGATGAAAACCTTGTTAGCAAGCTTAGTGACTTCGGAATCAGTCGTCTATTATCTTGTCATGGGAGTTCAAGTAACAATACTACAGAGTGCTGGAGAACTGACCCAAAGGGCACTTTTGTCTACATGGATCCTGAATTCCTTGCTTCAGGGGAACTTACTCCAAAGTCAGATATATATTCACTTGGAATCATATTATTAAGATTGTTGACCGGTAGACCAGCCTTGGGAATAAGGCAGGAAGTGAAAAGTGCATTGGATGCTGGAAAGTTGAAATCCCTCTTGGATCCTTTGGCTGGAGACTGGCCATTTGTACAGGCTGAACAGTTGTGTCACTTGGCATTGAGATGTTGTGAGATGAACCGAAAGAGCCGGCCAGACCTGTATTCAGAAGTCTGGAGGATTCTGGAACCAATGAGCGCTTCTTCTGGAGGCACAAATTCCTTCAGAATTGGTTCTGGAGGGCTTTACCATACGCCTTCATATTTCATTTGTCCAATCTTCCAGGAAGTCATGCAAGATCCGCATGTTGCAGCGGATGGATTTACATACGAAGCAGAGGCCATACGAGGATGGCTGGACAGTGGTCATGAGGCTTCTCCAATGACAAATGATAAGCTTGCACATTCCAATCTTGTCCCTAACCTTGCCCTTCGCTCTGCAATCCAGGATTGGCTTCAAAATCGCTGA 2598 0.4353 MGEFVGEPNPGVVEEKIYVAVSKDVKECKLNLIWAIQNSGGKKICILHVHEPATMIPLMGANFPTNALKDQEVEAYRETEMQNVHKILNEYLLICQRMGLRAEKLHIERDCIEKGIVELVSEYDIRKLVMGAASDKSYSRKMMDLRSKKAIYVLEQASASCHIQFICKGHLIYTRYSSLDKSKGEAASPVSQQRSQPNAGRAPHLRSQSIELGRNHWVRLTNPAQDLFRRVRSGNARHEGSVATISSPDDTEGLLSPHSRLGIEVSSDESEGPSGRSPSVVSTFSDSSAVEAASTPDLITERIENVLDLSGQSSIKGDFSHSSTPSVLDGGMDYNLYDQLEQAIDEAENARQDAYQETVRRGKDEKHAIDTIRRAKASEITYTEELKVRKEVEEALAKTKEELEQMKIQRDKVNEELRLALDQKSSLESQISSSELMVKELEQKIISAVGLLQSFKKERDELEVKRDNALREAEELRKKPAGAPDTRVPQFFLEFSFPEIEEATDSFNPSLKIGEGGYGSIYKGMLRHTEVAIKMLNSNSLQGPSEFQKEVDILSKLRHPNVITFIGACSESWALVYEYLPNGSLEDRLIYKDNTPPLSWQTRIRIAAELCSALIFLYSSKPHSIVHGDLKPSNILLDENLVSKLSDFGISRLLSCHGSSSNNTTECWRTDPKGTFVYMDPEFLASGELTPKSDIYSLGIILLRLLTGRPALGIRQEVKSALDAGKLKSLLDPLAGDWPFVQAEQLCHLALRCCEMNRKSRPDLYSEVWRILEPMSASSGGTNSFRIGSGGLYHTPSYFICPIFQEVMQDPHVAADGFTYEAEAIRGWLDSGHEASPMTNDKLAHSNLVPNLALRSAIQDWLQNR 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0038 865 SUPERFAMILY Protein kinase-like (PK-like) 488 770 IPR011009 -
Lele40g0038 865 Pfam Protein kinase domain 511 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0038 865 ProSitePatterns Protein kinases ATP-binding region signature. 513 534 IPR017441 GO:0005524
Lele40g0038 865 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Lele40g0038 865 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 35 134 - -
Lele40g0038 865 Gene3D Transferase(Phosphotransferase) domain 1 580 784 - -
Lele40g0038 865 Pfam U-box domain 796 864 IPR003613 GO:0004842|GO:0016567
Lele40g0038 865 ProSiteProfiles Protein kinase domain profile. 507 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0038 865 MobiDBLite consensus disorder prediction 270 294 - -
Lele40g0038 865 PANTHER OS02G0152300 PROTEIN 17 860 - -
Lele40g0038 865 MobiDBLite consensus disorder prediction 184 203 - -
Lele40g0038 865 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 794 865 IPR013083 -
Lele40g0038 865 CDD STK_N 16 169 - -
Lele40g0038 865 Gene3D HUPs 15 163 IPR014729 -
Lele40g0038 865 SMART Ubox_2 798 861 IPR003613 GO:0004842|GO:0016567
Lele40g0038 865 MobiDBLite consensus disorder prediction 239 253 - -
Lele40g0038 865 SUPERFAMILY RING/U-box 792 863 - -
Lele40g0038 865 Gene3D Phosphorylase Kinase; domain 1 486 579 - -
Lele40g0038 865 SMART serkin_6 507 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0038 865 Coils Coil 337 357 - -
Lele40g0038 865 MobiDBLite consensus disorder prediction 184 204 - -
Lele40g0038 865 Coils Coil 382 479 - -
Lele40g0038 865 MobiDBLite consensus disorder prediction 237 296 - -
Lele40g0038 865 ProSiteProfiles U-box domain profile. 794 865 IPR003613 GO:0004842|GO:0016567
Lele40g0038 865 CDD RING-Ubox_WDSUB1_like 799 840 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0038 Lele-ChrLele40 257225 262476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0038 4 864 U-box Gene Family AT2G45910 54.588 0.0 903
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lele40g0038 Pkinase 1.1e-43 CL0016