Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0030 ATGATCCTGGTACTATCAGTTCTTGTGTTGGAGTCACACTTTGTGGAAGCGAAAATACACGTGAGGATGACCAACATGTTAGATAATAATTTGGAGCTGACTATTCATTGCAAATCCAAAAATGACGACCTCGGGGAGCGTCATCTTCGTCATTTAGAACAATATGAGTTCATTTTCAACCCCAATATTTGGGGGACAACTCTATATTATTGTAGCTTTCAATGGGAAGGAGTTTTAAAGTGGTTCGATATATACAACGATAAGAGGGATGCATGTACTACGGGGCATTGCAATTGGAAAATTAAGAAAGATCAAGTATGTTTCAATGATGGTGACCGTGAGGCACTGAGAGGAGTTGCTAATGTAACCTTGGAAGAAGATAATAGGTTGCTGATGGCAGACATTTCTGAATTGGAAGTCAAGAAGGCAGTCTTTGAACTTGGGTGTGGGAGTGGGGGTGTTCGAAAGCAGCATGGATTTGGAGTAGTATTGACAAAGGGCGGACAATGGTGGGCACTGGATATGGAGAAAGCACAAGCATTGTTGGAAAATTTGATTGAGGAAAGGAGGGCAGCAATTGCTTTTGTGGTCCTTGATGCTAATGGGAGGCTACTTAATGGTGCTACTCTGCAGGAGGCCATGATCTGTGCGTATGATAACGAGCTGGATAACGTCCATTTTGAGTCTGATAATCAAGTGCTAGTTAGGTCTGATAATCTAGCATATCATTAA 732 0.418 MILVLSVLVLESHFVEAKIHVRMTNMLDNNLELTIHCKSKNDDLGERHLRHLEQYEFIFNPNIWGTTLYYCSFQWEGVLKWFDIYNDKRDACTTGHCNWKIKKDQVCFNDGDREALRGVANVTLEEDNRLLMADISELEVKKAVFELGCGSGGVRKQHGFGVVLTKGGQWWALDMEKAQALLENLIEERRAAIAFVVLDANGRLLNGATLQEAMICAYDNELDNVHFESDNQVLVRSDNLAYH 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0030 243 PANTHER - 14 110 IPR010264 -
Lele40g0030 243 Coils Coil 121 141 - -
Lele40g0030 243 Pfam Plant self-incompatibility protein S1 20 112 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0030 Lele-ChrLele40 217187 219400 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0030 12 107 Carbohydrate Esterase AT3G16970 42.157 8.02e-21 83.6