Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0028 ATGTCACAACTTCTACAATCCATCATCCTCGTACTATCAGTTCTTGTGTTGGTTGAGGCCGACACGCGCGTGAGCATAAGCAACAATTTATACAACAATTTGGAGCTGAGTATTCATTGCCGATCTGGAGATGCAGATATGGGTGTGCACGTAGTTCTTCCTCAACAAAGTTACGATTTTCATTTCACTCCTAAAGAGAAGGGAACAACTCTCTTCTATTGTAGCTTTGATTGGGAAGGAGTTCAGAAATGGTTTGATGTATATGATAGTGCCAGGGATGAAAGCAATTGCCTTGATGATTATTGCTTGTGGGTAATTTCGCAAGATCAACCATGTCAGTTTAATGCACCTGTTGGTAACGGTGTTCTTGCGTTGGCACCGCACTTGGTCCAATCCAAAACACATGTGAAGATCACAAAAATGTTAGATAATAATTTGGACCTGATTCTTCATTGCAAATCAAAAGATGACGACCTCGGGGAGCATCTTCTTCATGAGTTAGAATCTTTTGAGTTCAATTTCGACCCCAATTTTTGGGGTACAACCTTGTCCTATTGTAGCTTTCAATGGGAAGGAACTTTAGAGTGGTTTGATATATACAGATATGGAAGGGATGTGCTACCGAGCTTAGCACTTCCGTTGGCCTCAAACACTGCAGATGACAGAACGATCGTGAGGATCAACAACATGTTAGATGATAATTTGGACTTGACTATTCATTGTAAATCCAAAGATGACGATCTCGGGGAGCATGTTCTTCCCCATTTAGAAACTTTTGAGTTCGGTTTCAACACCAATATTTGGGGGACAACTCTATTCTATTGTAGCTTTCAACGGGAAGGAGGTTTTAAGCGGTTTGACATATACGACTATGGAAGGGATGGAACAGAATGTGTTACCAATCAGTGCAACTGGAAAATTAAGCCGAAAGATCAACCGTGCATGAATGATGGTGATCATAAGGCTGAGCTATGTTTTGTAAGGATGACTAATACGTTTTGCAATATCGTACTGATCAATAAATAA 1026 0.4045 MSQLLQSIILVLSVLVLVEADTRVSISNNLYNNLELSIHCRSGDADMGVHVVLPQQSYDFHFTPKEKGTTLFYCSFDWEGVQKWFDVYDSARDESNCLDDYCLWVISQDQPCQFNAPVGNGVLALAPHLVQSKTHVKITKMLDNNLDLILHCKSKDDDLGEHLLHELESFEFNFDPNFWGTTLSYCSFQWEGTLEWFDIYRYGRDVLPSLALPLASNTADDRTIVRINNMLDDNLDLTIHCKSKDDDLGEHVLPHLETFEFGFNTNIWGTTLFYCSFQREGGFKRFDIYDYGRDGTECVTNQCNWKIKPKDQPCMNDGDHKAELCFVRMTNTFCNIVLINK 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0028 341 PANTHER - 223 317 IPR010264 -
Lele40g0028 341 Pfam Plant self-incompatibility protein S1 23 116 IPR010264 -
Lele40g0028 341 Pfam Plant self-incompatibility protein S1 225 326 IPR010264 -
Lele40g0028 341 Pfam Plant self-incompatibility protein S1 135 205 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0028 Lele-ChrLele40 208532 211103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0028 199 326 Carbohydrate Esterase AT3G16970 36.641 1.29e-15 71.2