Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0027 ATGGCAACCAATATGCAGAAGCTAACTGGGACAAGTGAATATGATGAGGAAGATCTGGGAATGGATGTGAAAGAAGAGGATGATGAGGATGAAGAGAATGTAGGTAATCATGCTGATGCTCCAGTGCTGGTAGATGTTGATGGTGGGATGGGAACTGTTAGTGGTAACAACATTTTTCAACATCACCAGCAATTTCAAGAACAAACAAGCACTCCAGGTGGAGGTACTCGAAGGTGTAGGCCTCTAGAAGAGAAAGAGAGAACAAAGCTAAGAGAGAGGCATCGTAGGGCTATAACTGCGAGGATTTTGGGTGGGCTTCGGAGGCATGGCAACTATAATCTTAGAGTTAGAGCTGACATAAATGATGTCATTGCTGCTCTGGCAAGGGAAGCTGGATGGGTAGTTCTTCCAGATGGCACTACTTTTCCTTCAAGATCTCAGGGTCAGAGACCAGCTGGCGGTACTTCTACTGTGGTGACTTCATCGGGTTCCCATATGGCTTCACAACAGACTTCACCTACTTCCCTCAAGGGAGCCACTTCAGGTTATAGGAGCTCTTCAGAGTATAATGCAAGTCGATTGGAAGGTGTTTTTATGCCTGCTCCAACACCTCACGATCTAACCTCAGGTTCCCAGTCTCAATCATCATCCATGATGGGGAGTGGAGAAGAACAGAGAGACAACCATCGTCTCATTGGCTGTTCAATGGATCATGTTGATGAGAAGCAGATTGTGGACATGCGCCACAGATTTACTGAGCGTGATTTTGCTGGTACCCCGTTTGTTCCAGTTTATGTGATGCTACCGTTGGATGTCATTAACATGAAGTGTGAGCTTGTTGATCCGGATGTTCTATTAAAGCAGCTGGGGGTGTTGAAATCATTGCATGTTGATGGTGTTATGGTAGACTGCTGGTGGGGAATAGTGGAGGCACATGCTCCTCTGGAGTATAATTGGAACGGTTACAAGAAACTTTTTCAGATGGTGCGTGAACTTAAGCTTAAGTTGCAGGTTGTGATGTCATTTCATGAATGTGGAGGCAATTTTAGTGACGATGTTTGTATTCCAATACCCCATTGGGTTGCTGAAATTGGTAGGAGAAATCCTGACATTTTTTTCACTGATAGAGAGGGAAGGCGCAACCCTGAATGTCTTTCTTGGGGAATAGATAAGGAACGGATTTTAAGAGGTCGGACTGCTTTAGAGGTTTATTTTGACTTCATGAGAAGCTTCAGGGTAGAGTTTGATGAGTATTTTGAGTATGGTATAATCTCTATGATTGAAGTTGGACTCGGTCCACTTGGGGAGCTAAGATACCCATCTTATTTTGTAAAGCATGGTTGGAGATATCCTGGTATTGGGGAATTCCAGTGCTATGATCAATATTTGTTAAAAAGTCTTAGGAAGGCAGCAGAAACAAGGGGACACCCCACGTGGGCTAGAGGACCAGATAATGCTGGTACCTATAATTCACAACCACACGAAACAGGTTTCTTTTGTGATGGAGGAGATTATGATGGTTACTATGGCAGGTTTTTTCTTAGCTGGTACTCTCAGGTTTTGGTTGATCATGGAAACCGTGTACTTTCTCTGGCAAAATTAGCTTTTGAGAGAACCTGCATTGCTGCAAAGAACGATGGAAGGTATTTAATTTGTTGTGTCTTGATACAGTCTGTTTGCTATATTTTAATTTCTAAACAGCTATCAGGTATTCACTGGTGGTACAAGACTGTGAGTCATGCGGCTGAATTAACTGCTGGGTTTTATAACCCATGCAATCGTGATGGTTATGTTGCAATCATGACAATGCTAGAGAAGAATGGAGCAAGTTTAAACTTAGCTTGCGCTGACCTGCACTCATTGAATCAGCATGATGACTTTCCAGGAGCATTTTCAGATCCTGAGGGATTAGTCTGGCAGGTGTTGAATGGAGCATGGGATATTTGCCTCCCAGTTTCAAGTGAGAATGCACTTCCTTGCCTAAATAGAGCTGGCTATAATAAGATTTTGGATAATGCCAAGCCCGTGAATGAACCAGATGGAAAACATTTTACATCGTTTACTTACCTGAGACTGAGTCCACTTCTTATGGAAAGACAAAACTTCTTAGAGTTTGAACGATTTGTGAAGAGAATGCATGGGGAAGCTGTTCTTGATCTCCAGGCATAG 2169 0.4315 MATNMQKLTGTSEYDEEDLGMDVKEEDDEDEENVGNHADAPVLVDVDGGMGTVSGNNIFQHHQQFQEQTSTPGGGTRRCRPLEEKERTKLRERHRRAITARILGGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPSRSQGQRPAGGTSTVVTSSGSHMASQQTSPTSLKGATSGYRSSSEYNASRLEGVFMPAPTPHDLTSGSQSQSSSMMGSGEEQRDNHRLIGCSMDHVDEKQIVDMRHRFTERDFAGTPFVPVYVMLPLDVINMKCELVDPDVLLKQLGVLKSLHVDGVMVDCWWGIVEAHAPLEYNWNGYKKLFQMVRELKLKLQVVMSFHECGGNFSDDVCIPIPHWVAEIGRRNPDIFFTDREGRRNPECLSWGIDKERILRGRTALEVYFDFMRSFRVEFDEYFEYGIISMIEVGLGPLGELRYPSYFVKHGWRYPGIGEFQCYDQYLLKSLRKAAETRGHPTWARGPDNAGTYNSQPHETGFFCDGGDYDGYYGRFFLSWYSQVLVDHGNRVLSLAKLAFERTCIAAKNDGRYLICCVLIQSVCYILISKQLSGIHWWYKTVSHAAELTAGFYNPCNRDGYVAIMTMLEKNGASLNLACADLHSLNQHDDFPGAFSDPEGLVWQVLNGAWDICLPVSSENALPCLNRAGYNKILDNAKPVNEPDGKHFTSFTYLRLSPLLMERQNFLEFERFVKRMHGEAVLDLQA 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0027 722 SUPERFAMILY (Trans)glycosidases 257 717 IPR017853 -
Lele40g0027 722 Gene3D Glycosidases 253 721 - -
Lele40g0027 722 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 562 578 IPR001554 GO:0000272|GO:0016161
Lele40g0027 722 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 317 335 IPR001554 GO:0000272|GO:0016161
Lele40g0027 722 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 339 360 IPR001554 GO:0000272|GO:0016161
Lele40g0027 722 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 637 659 IPR001554 GO:0000272|GO:0016161
Lele40g0027 722 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 597 620 IPR001554 GO:0000272|GO:0016161
Lele40g0027 722 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 296 310 IPR001554 GO:0000272|GO:0016161
Lele40g0027 722 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 579 590 IPR001554 GO:0000272|GO:0016161
Lele40g0027 722 PRINTS Plant beta-amylase signature 703 717 IPR001371 GO:0000272|GO:0016161
Lele40g0027 722 PRINTS Plant beta-amylase signature 422 431 IPR001371 GO:0000272|GO:0016161
Lele40g0027 722 PRINTS Plant beta-amylase signature 688 702 IPR001371 GO:0000272|GO:0016161
Lele40g0027 722 MobiDBLite consensus disorder prediction 142 184 - -
Lele40g0027 722 Pfam BES1/BZR1 plant transcription factor, N-terminal 75 210 IPR008540 -
Lele40g0027 722 MobiDBLite consensus disorder prediction 205 222 - -
Lele40g0027 722 Pfam Glycosyl hydrolase family 14 557 707 IPR001554 GO:0000272|GO:0016161
Lele40g0027 722 Pfam Glycosyl hydrolase family 14 265 540 IPR001554 GO:0000272|GO:0016161
Lele40g0027 722 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 211 715 IPR001554 GO:0000272|GO:0016161
Lele40g0027 722 MobiDBLite consensus disorder prediction 1 38 - -
Lele40g0027 722 MobiDBLite consensus disorder prediction 15 34 - -
Lele40g0027 722 MobiDBLite consensus disorder prediction 65 90 - -
Lele40g0027 722 MobiDBLite consensus disorder prediction 200 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0027 Lele-ChrLele40 203280 208127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0027 1 719 Glycoside Hydrolase AT2G45880 63.850 0.0 934
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Lele40g0027 Glyco_hydro_14 1.4e-76 CL0058