Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0014 ATGGGAAGAACACCCTGCTGCGACAAGAGGGGTTTGAAGAAAGGGCCCTGGACGGCTGAAGAGGACGAGCTCCTTGTAGATTACATCAAGAAGAATGGTGGCCATGGAAGCTGGCGTTCTCTCCCTAAGTTGGCAGGTCTGCTTCGGTGTGGGAAGAGTTGCAGGCTAAGGTGGACGAACTATCTAAGGCCTGATATAAAACGTGGTCCATTCAGCGTTGAGGAAGAGAAGCTTGTAATACAGCTTCATGGGATCCTTGGTAATAGGTGGGCGGCGATAGCGTCACAGCTACCAGGAAGAACAGACAATGAGATCAAGAATCTGTGGAACACTCACTTGAAGAAGCGAGTCTTGTGCATGGGATTCGACCCTCTCACCCACAAGCCTCTTTCTTCTTCTTCCTCTTCCTCTTCCGCTTCTAATCCCAACAAGCACCGCGCTGCTGCCTCCATCTCCACTCGCCACATGGCTCAGTGGGAGAGCGCCAGGCTCGAGGCCGAGGCTCGCCTCTCCAGAGAGACCTCTCTCTTCACCTCTCATGACTTGTTCCTCCGTCTCTGGAACTCCGACGTCGGCGACGCCTTCCGCAACATCGCCGTCTCGTCTCCGGGGTCCTATTCTTCCACCAAGTGCACCGTCACTACACCCTCTTTCTCCGCGCCAGCTCCAGCAACACGTACTTTCATGCCTGCGTCTGACGACTCTTCCATCTCCAATGACCTGGAAGACTCCTCAGACACCGCGTTGCAGCTCTTGTTGGACTTCCCCATTTACAATGACATGAACTTCTTAGAGGCTAACTCTTCCATTTCTCCTCTTTAG 822 0.5341 MGRTPCCDKRGLKKGPWTAEEDELLVDYIKKNGGHGSWRSLPKLAGLLRCGKSCRLRWTNYLRPDIKRGPFSVEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRVLCMGFDPLTHKPLSSSSSSSSASNPNKHRAAASISTRHMAQWESARLEAEARLSRETSLFTSHDLFLRLWNSDVGDAFRNIAVSSPGSYSSTKCTVTTPSFSAPAPATRTFMPASDDSSISNDLEDSSDTALQLLLDFPIYNDMNFLEANSSISPL 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0014 273 MobiDBLite consensus disorder prediction 130 152 - -
Lele40g0014 273 SMART sant 67 115 IPR001005 -
Lele40g0014 273 SMART sant 13 64 IPR001005 -
Lele40g0014 273 CDD SANT 16 62 IPR001005 -
Lele40g0014 273 Gene3D - 70 117 - -
Lele40g0014 273 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Lele40g0014 273 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Lele40g0014 273 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Lele40g0014 273 FunFam MYB transcription factor 70 117 - -
Lele40g0014 273 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Lele40g0014 273 FunFam Myb transcription factor 11 68 - -
Lele40g0014 273 Gene3D - 11 68 - -
Lele40g0014 273 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Lele40g0014 273 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 218 - -
Lele40g0014 273 MobiDBLite consensus disorder prediction 130 148 - -
Lele40g0014 273 CDD SANT 70 113 IPR001005 -
Lele40g0014 273 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Lele40g0014 273 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0014 Lele-ChrLele40 137515 138841 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0014 1 267 MYB Transcription Factor Family AT3G61250 63.668 7.42e-120 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele40g0014 Myb_DNA-binding 4.5e-14 CL0123