Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0010 ATGAAGAGAACTTGGTCTAGTAAGAAAAGTGATATTCTTACGGGATCTAAAGCAATTTGGGTAAAGTGTCAGGGTAATGATTCTTTGGCTTATGTTAATGGTAATGGTCGTAATGTAGATTATGCCAAAGGTTCTGTTGAGGAATTGGGATTAGAGTCTACTTCTAGTGCTGAACTGACTGTATTAGTGGAAGGGGAAGAAGGGGGACACGAAGTCGAAGAAGACACGCACAATGCGGATGAACTGAAAGAATTATTGCAAAAGGCCTTGATGGACTTAGAAGTTGCAAGAGTAAATAGTGCCATGTTCGAGGAGAAGGTTAAAAAAATTTCAGAGTCTGCAATATCTTTGCAGGATGAAGCATCAAATGCTTTGAACAATGTTAATTCTACTCTTGATGTTATCCAAGAGATTGAGACTGAAGAATTTATGGCGAAGGAAGCTGTTCAAAAAGCAACGATGGCTCTTTCCTTGGCTGAGGCGAGGCTACAAGTGGCCATAGAATCTATGGAGGTTGCAAAAGAAGAGCATGATTCTTCGCAAGGTTCTAATGAGAGTGTTGAGGACGATGAAATAACAGAGGAGGAGAAAGCACTTTTGGCTGCTCAGGAAGATGTCAACGAATGCCAGACAAATTTAGCAAATTGTGAAGCAGCACTGAGACACTGCCACAATAGAAAGGAGGAATTGCAGAAGGAAGTGGAGAAGTTGAATGGACTCGCTGAAAAGGCACAGCTGAATGCATCAAAAGCAGAGGATGATGTCACAAATATAATGCTTTTAGCAGAGCAAGCTGTTGCCTTTGAACTTGAGGCTACTCAGCGAGTAAATGATGCTGAGATTGCCTTACAGCGAGCAGAAAAATCCATTTCGAGTCCTAATGTTGATACCACAGAAACTATCCAAATACAAGATTCTGAGGGTGTTTCTGAGGATGGGAAAGCAGTTCAAGACTTCTCTGGGGAGTTCATTACTGAAGGGGATGTAGATCTGCCAATTGATGATGAATCCTTGCTTCAGAAGCGATCACCTGAAACACTAACTGATAAAAGCAGCCAAAGTTTGGGGGAGTCAGCTCACTCTGATTATCTGAGTGATAATGAGAATGGACAGTTAAACTTAGACTCTTTTGTGGAAGCTGAAGCAGAAGTGGAGAAATTGAAGAATGCTGTTCAGACAAAAAAGCAGGAGACACAGAAAGATTTTACTAGAGATGGCTCACCCTTTGCTCCCAAAGGATTATTGAAGAAGTCATCCCGTTTCTTTTCTGCATCATTCTTCTCTTTCTCAGAAGATGGAACCGAGTTCACTCCAGCATCATTTTTCCAAGGTTTTGTGGAATCTGTACAGAAGCAGTTACCTAAGGTGGTTCTTGGGTTATTGTTAATGGGAGCAGGGGTTGCCTTTTATGCCAATCGAGGAGAGAGGAGCTCTCAGCTCTTTCAACAGCCAGAAGTCATTGCAAGCAGTGTGGAAGAAGTTTCCTCAAGTACAAAACCTCTGGTCAGACAACTTCGGAAACTTCCTAAGAGAATCAAGAAAATTATTTCATCATTACCTCAACAAGAGGTGAATGAGGAGGAAGCCTCTCTCTTTGACATGCTTTGGTTATTGTTGGCAAGTGTTATATTTGTGCCTATATTTCAAAAAATTCCTGGAGGGAGTCCTGTTCTTGGCTATTTGGCTGCTGGTATCTTGATTGGGCCTTATGGTCTCTCCATCATCCGTCACGTTCATGGGACAAAAGCAATAGCTGAATTTGGAGTTGTTTTCTTATTATTCAATATCGGCCTGGAGCTCTCTGTTGAAAGGCTTAGTTCAATGAAGAAATATGTCTTTGGATTAGGCTCTGCTCAGGTCTTGTTGACTGCTGCAGCAGTTGGTTTGGTGGCTCATTATGTTTGTGGTCTAGCTGGCCCTGCTTCAATTGTTATTGGGAATGGTCTGGCGTTATCATCCACTGCTGTTGTTCTGCAAGTTTTGCAGGAGAGAGGGGAGAGCACATCGCGGCATGGTCGAGCTACTTTTTCTGTTTTACTTTTTCAGGATTTGGCTGTTGTGGTCTTGCTAATACTCATCCCCCTTATTTCACCAAATTCTTCCAAAGGAGGGGTTGGTTTCCAAGCCATTGCTGAAGCTCTTGGATTGGCTGCTGTTAAGGCAGCAGTTGCCATCACTGCCATAATTGCTGGTGGACGATTGCTCCTTCGACCAATATATAAACAGATTGCTGAAAATCAGAATGCAGAAATATTTTCAGCGAATACACTCCTTGTTATTCTTGGGACTAGTCTTCTTACTGCTAGGGCAGGACTTTCCATGGCACTTGGGGCATTTCTGGCTGGTTTACTTCTTGCAGAAACTGAATTTTCCTTACAGGTTGAATCTGATATTGCTCCATATCGTGGTCTTCTATTGGGGCTCTTCTTTATGACGGTTGGAATGTCAATTGATCCAAAACTCCTTGTGTCAAACTTTCCAGTCATCACAGGGACACTTGGACTCTTAATTTTTGGCAAGACTATATTGGTTTCTTTGATTGGAAAAAGCTTTGGGATTTCACTCATTTCTGCCATTAGAGTTGGTCTCCTTCTTGCTCCTGGAGGGGAATTTGCCTTTGTGGCTTTTGGCGAAGCTGTTAATCAGGGCATAATGTCTTCCCAACTTTCATCTTTGCTATTTCTTGTTGTGGGAATCTCTATGGCTCTCACACCATGGTTAGCTGCAGGCGGCCAGCTTATTGCTTCCCGTTTTGAGCTGCATGATGTTCGAAGCTTATTACCTGTAGAAAGTGAGACGGATGATTTACAAGATCACATCATTATCTGTGGATTTGGACGAGTTGGCCAGATCATTGCTCAACTTCTTTCTGAGCGACTGATCCCTTTTGTTGCTCTAGATGTGAGAAGTGATAGAGTGGCAGTTGGTCGTGCTCTGGATCTCCCTGTATACTTTGGAGATGCTGGTAGTCGTGAGGTCCTACACAAGATTGGGGCTGAAAGAGCATGTGCTGCAGCAGTAACTCTAGATTCTCCTGGTGCAAATTATCGAACAGTTTGGGCTCTGAGCAAGTACTTCCCAAATGTGAAGACTTTTGTTCGAGCTCATGATGTTGACCATGGCCTGAATTTAGAAAAGGCTGGAGCTACTGCTGTTGTACCAGAGACCCTGGAACCTAGTCTTCAACTAGCAGCTGCTGTACTTGCTCAGGCTAAACTTCCCACGTCAGAGATTGCATCAGCTATAAATGAATTCAGATCCCGACATCTGGCTGAGCTTACTGAGCTGTGTGAAACAAGTGGCAGTTCTCTTGGTTATGGATTTAACCGAACCGCGAGCAAATCCAAATCTCAATCCTCAGATTCATTGGATGATAACCAAATCTCTGAAGGGACACTGGCAATATGA 3408 0.4302 MKRTWSSKKSDILTGSKAIWVKCQGNDSLAYVNGNGRNVDYAKGSVEELGLESTSSAELTVLVEGEEGGHEVEEDTHNADELKELLQKALMDLEVARVNSAMFEEKVKKISESAISLQDEASNALNNVNSTLDVIQEIETEEFMAKEAVQKATMALSLAEARLQVAIESMEVAKEEHDSSQGSNESVEDDEITEEEKALLAAQEDVNECQTNLANCEAALRHCHNRKEELQKEVEKLNGLAEKAQLNASKAEDDVTNIMLLAEQAVAFELEATQRVNDAEIALQRAEKSISSPNVDTTETIQIQDSEGVSEDGKAVQDFSGEFITEGDVDLPIDDESLLQKRSPETLTDKSSQSLGESAHSDYLSDNENGQLNLDSFVEAEAEVEKLKNAVQTKKQETQKDFTRDGSPFAPKGLLKKSSRFFSASFFSFSEDGTEFTPASFFQGFVESVQKQLPKVVLGLLLMGAGVAFYANRGERSSQLFQQPEVIASSVEEVSSSTKPLVRQLRKLPKRIKKIISSLPQQEVNEEEASLFDMLWLLLASVIFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLLTAAAVGLVAHYVCGLAGPASIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGLAAVKAAVAITAIIAGGRLLLRPIYKQIAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLVSNFPVITGTLGLLIFGKTILVSLIGKSFGISLISAIRVGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLVVGISMALTPWLAAGGQLIASRFELHDVRSLLPVESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAVGRALDLPVYFGDAGSREVLHKIGAERACAAAVTLDSPGANYRTVWALSKYFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPTSEIASAINEFRSRHLAELTELCETSGSSLGYGFNRTASKSKSQSSDSLDDNQISEGTLAI 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0010 1135 FunFam K(+) efflux antiporter 2 chloroplastic 935 1099 - -
Lele40g0010 1135 Gene3D - 527 913 IPR038770 -
Lele40g0010 1135 TIGRFAM 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 538 818 IPR004771 GO:0006812|GO:0008324|GO:0016020
Lele40g0010 1135 Coils Coil 377 397 - -
Lele40g0010 1135 Gene3D - 935 1099 - -
Lele40g0010 1135 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 113 1126 - -
Lele40g0010 1135 ProSiteProfiles RCK N-terminal domain profile. 939 1061 IPR003148 GO:0006813
Lele40g0010 1135 Pfam TrkA-N domain 940 1053 IPR003148 GO:0006813
Lele40g0010 1135 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 936 1077 IPR036291 -
Lele40g0010 1135 Coils Coil 269 289 - -
Lele40g0010 1135 MobiDBLite consensus disorder prediction 339 367 - -
Lele40g0010 1135 MobiDBLite consensus disorder prediction 173 193 - -
Lele40g0010 1135 Pfam Sodium/hydrogen exchanger family 537 907 IPR006153 GO:0006812|GO:0015299|GO:0016020|GO:0055085
Lele40g0010 1135 Coils Coil 156 176 - -
Lele40g0010 1135 MobiDBLite consensus disorder prediction 1112 1135 - -
Lele40g0010 1135 Coils Coil 192 254 - -
Lele40g0010 1135 FunFam K(+) efflux antiporter 2 chloroplastic 527 913 - -
Lele40g0010 1135 Coils Coil 72 99 - -
Lele40g0010 1135 MobiDBLite consensus disorder prediction 344 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0010 Lele-ChrLele40 85582 112188 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0010 23 1135 Inorganic Solute Cotransporters AT4G00630 72.085 0.0 1446