Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele39g1411 | ATGGCAAGGTTAAAGATACCACCACCTGATACGCGCTATAGAACAGAGGATGTAACAGCAACTAAAGGAAATGAATTTGAGGATTATTTTTTGAAGCGTGAGCTGCTTATGGGAATATATGAGAAGGGTTTTGAAAGGCCTTCTCCTATTCAGGAAGAAAGTATACCAATTGCACTTACTGGTAGTGACATTCTTGCTAGGGCTAAGAATGGAACAGGAAAAACAGCTGCCTTTTGCATTCCTGCATTGGAAAAAATTGACCAGGATAACAATGTTATTCAAGCTGTTATACTGGTCCCAACACGAGAGTTGGCCTTGCAAACATCTCAAGTGTGCAAAGAGTTGGGAAAACATTTGAAAATTCAAGTTATGGTTACGACAGGTGGTACCAGCCTGAAGGATGATATTATGCGGTTATATCAGCCAGTTCATTTACTAGTTGGAACGCCAGGACGAATATTAGATCTTGCGAAAAAGGGTGTTTGTGTTTTGAAAGATTGCAGTATGCTTGTTATGGATGAGGCTGATAAGCTCCTCTCCCCAGAGTTCCAGCCTTCAATAGAGCAGTTGATTCATTTGCTGCCTACAATTCGTCAAATATTGATGTTTTCAGCCACTTTTCCTGTCACCGTTAAGGACTTTAAAGATAGATATCTCAAAAACCTTACGTTATTAACCTTATGGACGATGAATCGAGTTGAGCTCCTTGCCAAGAAAATAACAGAACTTGGGTATTCATGTTTCTATATTCATGCGAAGATGTTGCAAGATCATCGCAATAGAGTATTTCATGATTTCCGCAATGGTGCATGTAGGAATCTCGTTTGTACTGATCTTTTTACTAGAGGAATAGACATTCAAGCTGTCAATGTTGTCATTAATTTTGATTTTCCGAAGAACTCAGAAACTTATCTGCACAGGGTTGGTCGATCAGGGAGGTTTGGACACCTTGGTTTAGCCGTGAACTTGATTACTTACGAAGACCGCTTTAATTTGGTTTCCTTTGCATTTGTGGTGGATGTGGCTGTTCAATTTGTAGTAAAGCATGAGAGGAGATGCAGTATGAGAATTTGGTTATTGTGGGACTGTGGGGAATGA | 1098 | 0.3989 | MARLKIPPPDTRYRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQAVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIEQLIHLLPTIRQILMFSATFPVTVKDFKDRYLKNLTLLTLWTMNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLVSFAFVVDVAVQFVVKHERRCSMRIWLLWDCGE | 365 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele39g1411 | 365 | FunFam | ATP-dependent RNA helicase DDX6 | 5 | 227 | - | - | |
Lele39g1411 | 365 | SMART | helicmild6 | 234 | 315 | IPR001650 | - | |
Lele39g1411 | 365 | ProSitePatterns | DEAD-box subfamily ATP-dependent helicases signature. | 171 | 179 | IPR000629 | - | |
Lele39g1411 | 365 | CDD | SF2_C_DEAD | 231 | 324 | - | - | |
Lele39g1411 | 365 | CDD | DEADc_DDX6 | 26 | 221 | - | - | |
Lele39g1411 | 365 | Gene3D | - | 22 | 219 | IPR027417 | - | |
Lele39g1411 | 365 | PANTHER | DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 | 3 | 232 | - | - | |
Lele39g1411 | 365 | ProSiteProfiles | DEAD-box RNA helicase Q motif profile. | 24 | 52 | IPR014014 | GO:0003724 | |
Lele39g1411 | 365 | SMART | ultradead3 | 43 | 241 | IPR014001 | - | |
Lele39g1411 | 365 | Pfam | DEAD/DEAH box helicase | 49 | 213 | IPR011545 | GO:0003676|GO:0005524 | |
Lele39g1411 | 365 | Gene3D | - | 220 | 330 | IPR027417 | - | |
Lele39g1411 | 365 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 55 | 225 | IPR014001 | - | |
Lele39g1411 | 365 | Pfam | Helicase conserved C-terminal domain | 221 | 315 | IPR001650 | - | |
Lele39g1411 | 365 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 61 | 351 | IPR027417 | - | |
Lele39g1411 | 365 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 14 | 224 | IPR027417 | - | |
Lele39g1411 | 365 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 214 | 354 | IPR001650 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele39g1411 | Lele-ChrLele39 | 22310470 | 22314439 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele39g1411 | 24 | 344 | Eukaryotic Initiation Factors Gene Family | AT1G72730 | 36.264 | 2.76e-72 | 229 |