Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1405 ATGGATCGAGGGGACCATATGGCATCTTACTATATGCAGAGAGGGATAGGTGGTGGTGGAGAACAAGCTGAGTTACATGGTTCCCTCGGTATTCGTCCCCTCTCGAATCCCAATCTGCCATTTCAACCTGGCATTGGAGGAGGAGGAGGCGGCTGCGGCATTGGATCCAAATTGGCTGTAGAATCTTCAGCAATTTCACCTCATGGTGTCAATGTGGGTGCTCCTCCTGGGGCACCGCCGGGAGAACCCGTCAGAAGGAAGAGAGGAAGGCCTAGAAAATATGGTCCAGATGGAAGTGTATCATTGGCTTTGACTCCATCATCGTCCGGTCATCCCACCGGAGCATTGACACAAAGCCAGAAGCGAGGCAGAGGCCGTCCTGCGGGATCTGGAAAGAAACAGCAGTTGGCCTCTCTTGGTGAATTGATGTCTGGTTCAGCAGGAATGGGCTTTATTCCTCATATCATTACCATTGCAGTTGGAGAAGACATTGCAACAAAAATAATGGCATTTTCTCAGCAAGGACCTAGAACCGTATGCATTTTGTCAGTAAATGGTGCTGTCTCCAATGTGACGCTTCGACAGCCTTCAAGTTCGGGTGGCACTGTCACATACGAGGGGCGTTTCGAGATATTGTGCCTATCAGGCTCTTATTTGCTCACAGAAAGTGGTGGCTCTCGCAATCGAACTGGTGGTCTTAGTGTTTCGCTGGCTAGTCCTGATGGCCGTGTCATTGGTGGTGGTGTCGGCGGATTGCTGATTGCAGCGAGTCCTGTTCAGGTGATAGTTGGGAGCTTCATGTGGGGTGGATCAAAGACCAAGAGCAAGAAAAAGGAGGTTGCAGAAGAAGCAGAAGTAGCCATGGAATCGGATCATCATCATCGACAACAACAAGAGGCTCATAATCCATCTGCAATGAACATCATTTCACCTAATCAAAATCTCACGCAAGCTTCATCTATGAGTTCCTGGCCGGCTGCTTCTCGTCAATTGGACATGCGTGGGTGA 1008 0.498 MDRGDHMASYYMQRGIGGGGEQAELHGSLGIRPLSNPNLPFQPGIGGGGGGCGIGSKLAVESSAISPHGVNVGAPPGAPPGEPVRRKRGRPRKYGPDGSVSLALTPSSSGHPTGALTQSQKRGRGRPAGSGKKQQLASLGELMSGSAGMGFIPHIITIAVGEDIATKIMAFSQQGPRTVCILSVNGAVSNVTLRQPSSSGGTVTYEGRFEILCLSGSYLLTESGGSRNRTGGLSVSLASPDGRVIGGGVGGLLIAASPVQVIVGSFMWGGSKTKSKKKEVAEEAEVAMESDHHHRQQQEAHNPSAMNIISPNQNLTQASSMSSWPAASRQLDMRG 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1405 335 CDD DUF296 153 266 IPR005175 -
Lele39g1405 335 MobiDBLite consensus disorder prediction 285 335 - -
Lele39g1405 335 FunFam AT-hook motif nuclear-localized protein 1-like 153 284 - -
Lele39g1405 335 MobiDBLite consensus disorder prediction 300 327 - -
Lele39g1405 335 ProSiteProfiles PPC domain profile profile. 147 287 IPR005175 -
Lele39g1405 335 Gene3D - 153 295 - -
Lele39g1405 335 MobiDBLite consensus disorder prediction 285 299 - -
Lele39g1405 335 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 73 314 IPR039605 GO:0003680
Lele39g1405 335 Pfam Plants and Prokaryotes Conserved (PCC) domain 153 266 IPR005175 -
Lele39g1405 335 MobiDBLite consensus disorder prediction 66 136 - -
Lele39g1405 335 MobiDBLite consensus disorder prediction 101 124 - -
Lele39g1405 335 SUPERFAMILY AF0104/ALDC/Ptd012-like 152 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1405 Lele-ChrLele39 22253721 22256780 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g1405 1 266 AT-hook Motif Nuclear Localized (AHL) Family AT2G45850 55.594 1.61e-79 242