Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1400 ATGGAAACTGATATGCAGAAGCTAATTGGAACAAGTGAAGATGATGAGGAAGAAATGGGAATGGATGTGAAAGAAGAGGATGATGAAGATGAAGAGAATGTAGGTAATCATGGTGATGCTCCAGTGATGGTAGACGTTGATGGTGGGATGGGAACTGTTAGTGGTAACAACAGTTCTCAACAGCATCAGCAATTTCAAGAACAAGCAAGCACTCAAGGTGGAGGTACTCGAAGGTGTAGGCCCCTAGAAGAGAAAGAGAGAACAAAGCTAAGAGAGAGGCATCGTAGGGCTATAACTGCGAGGATTTTGGCTGGGCTTCGGAGGCATGGCAACTATAACCTTAGAGTTAGAGCTGACATAAATGATGTCATTGCTGCTCTGGCAAGGGAAGCTGGATGGGTAGTTCTGCCAGATGGCACTACTTTTCCTTCAAGATCTCAGGGTCAGAGACCTGCTGGTGGTACTTCTACTGTGGTGACTTCATCAGGTTCCCATATGGCTTCACAACAGACTTCACCAACTTCCCTCAAGGGAGCCACTTCAGGCGATAAGAGCTCTTCAGAATATAATGCAAGTCGATTGAAAGGTGTTTTTATGCCTGCTCCAACACCTTATGATCTAACCTCATGGTCTCAATCTCAATCGTCATCCATGATGGGGAGTGGAGAAGAACAGAGAGACAACCATCCTCTCATTGGCTGTTCAATGGATAATGTTGATGAGAAGCAGATTGTGGACATGCCCCACATATTACCTGAGCGTGATTTTGCTGGTACCCCTTATGTTCCAGTTTATGTGATGCTACCGTTGGGTGTCATTAACATGAAGTGTGAACTTGTTGATCCGGATGGTCTATTAAAGCAGCTGAGGTTGTTGAAATCATTGCATGCTGATGGTGCTATGGTAGACTGCTGGTGGGGAATAGTGGAGGCACATGCTCCTCTGGAGTATAATTGGAATGGTTACAAGAAACTTTTTCAGATGGTGCGTGAACTTAAGCTTAAGTTGCAGGTTGTGATGTCTTTTCATGAATGTGGAGGCAATTTTGGTGACGATGTTTGTATTCCAATACCCCATTGGGTTGCTGAAATTGGTAGGAGCAATCCTGACATTTTTTTCACTGATAGAGAGGGAAGGCACAACCCGGAATGTCTTTCTTGGGGAATAGATAAGGAAAGGGTTTTAAGAGGTCGGACTGCTTTAGAGGTTTATTTTGACTTCATGAGAAGCTTCAGGGTAGAGTTTGATGAGTATTTTGAGGATGGTATAATATCTATGATTGAAGTTGGACTTGGTCCATGTGGGGAGCTAAGATACCCATCTTGCCCTGTAAAGCATGGTTGGAGATATCCTGGTATTGGTGAATTCCAGTGCTATGATCAATATTTGTTAAAAAGTCTTAGGAAGGCAGCAGAAACAAGGGGACACCCCTCGTGGGCTAGAGGACCAGATAATGCTGGTACCTATAATTCACAACCACCTGAAACAGGTTTCTTTTGTGATGGAGGAGATTATGATGGTTACTATGGCAGGTTTTTTCTTAGCTGGTACTCTCAGGTTTTAGTTGATCATGGAAACTCTGTACTTTCTCTGGCAAAATTAGCTTTTGAGGGAACCTGCATTGCTGCAAAGCTATCAGGTATTCACTGGTTGTACAAGACTGTGAGTCATGCTGCTGAATTAACTGCTGGGTTTTATAACCCGGGCAATCGTGATGGTTATGCTGCAATCATGGCAATGCTAAAGAAGAACGGAGCAAGTTTAAACTTAGCCTGCGCTGACCTGAACTCATTGAACCAGCATGAGAACTTTCCAGGAGCATTTTCAGATCCTGAGGGATTAATCTGGCAGGTGTTGAATGTAGCTTGGGATGTTTGCCTCCCAGTTTCAAGTGAGAATGCACTTCCTTGCCTAAATAGAGTTGGCTATAATAAGATTTTGGATAATGCCAAGCCCATGAATAATCCAGATGGAAAACATTTTACATCGTTTACTTACCTGAGACTAAGTCCACTTCTTATGGAAAGACAGAACTTCTTAGAGTTTGAACGATTTGTGAAGAGAATGCATGGGGAAGCCGTTCTTGATCTGCAGGCATAG 2100 0.4343 METDMQKLIGTSEDDEEEMGMDVKEEDDEDEENVGNHGDAPVMVDVDGGMGTVSGNNSSQQHQQFQEQASTQGGGTRRCRPLEEKERTKLRERHRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPSRSQGQRPAGGTSTVVTSSGSHMASQQTSPTSLKGATSGDKSSSEYNASRLKGVFMPAPTPYDLTSWSQSQSSSMMGSGEEQRDNHPLIGCSMDNVDEKQIVDMPHILPERDFAGTPYVPVYVMLPLGVINMKCELVDPDGLLKQLRLLKSLHADGAMVDCWWGIVEAHAPLEYNWNGYKKLFQMVRELKLKLQVVMSFHECGGNFGDDVCIPIPHWVAEIGRSNPDIFFTDREGRHNPECLSWGIDKERVLRGRTALEVYFDFMRSFRVEFDEYFEDGIISMIEVGLGPCGELRYPSCPVKHGWRYPGIGEFQCYDQYLLKSLRKAAETRGHPSWARGPDNAGTYNSQPPETGFFCDGGDYDGYYGRFFLSWYSQVLVDHGNSVLSLAKLAFEGTCIAAKLSGIHWLYKTVSHAAELTAGFYNPGNRDGYAAIMAMLKKNGASLNLACADLNSLNQHENFPGAFSDPEGLIWQVLNVAWDVCLPVSSENALPCLNRVGYNKILDNAKPMNNPDGKHFTSFTYLRLSPLLMERQNFLEFERFVKRMHGEAVLDLQA 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1400 699 PRINTS Plant beta-amylase signature 422 431 IPR001371 GO:0000272|GO:0016161
Lele39g1400 699 PRINTS Plant beta-amylase signature 665 679 IPR001371 GO:0000272|GO:0016161
Lele39g1400 699 PRINTS Plant beta-amylase signature 680 694 IPR001371 GO:0000272|GO:0016161
Lele39g1400 699 Pfam BES1/BZR1 plant transcription factor, N-terminal 75 214 IPR008540 -
Lele39g1400 699 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 317 335 IPR001554 GO:0000272|GO:0016161
Lele39g1400 699 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 539 555 IPR001554 GO:0000272|GO:0016161
Lele39g1400 699 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 339 360 IPR001554 GO:0000272|GO:0016161
Lele39g1400 699 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 614 636 IPR001554 GO:0000272|GO:0016161
Lele39g1400 699 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 556 567 IPR001554 GO:0000272|GO:0016161
Lele39g1400 699 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 505 524 IPR001554 GO:0000272|GO:0016161
Lele39g1400 699 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 296 310 IPR001554 GO:0000272|GO:0016161
Lele39g1400 699 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 574 597 IPR001554 GO:0000272|GO:0016161
Lele39g1400 699 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 432 454 IPR001554 GO:0000272|GO:0016161
Lele39g1400 699 MobiDBLite consensus disorder prediction 208 227 - -
Lele39g1400 699 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 218 692 IPR001554 GO:0000272|GO:0016161
Lele39g1400 699 Pfam Glycosyl hydrolase family 14 265 684 IPR001554 GO:0000272|GO:0016161
Lele39g1400 699 SUPERFAMILY (Trans)glycosidases 256 694 IPR017853 -
Lele39g1400 699 MobiDBLite consensus disorder prediction 142 188 - -
Lele39g1400 699 MobiDBLite consensus disorder prediction 208 223 - -
Lele39g1400 699 MobiDBLite consensus disorder prediction 15 34 - -
Lele39g1400 699 MobiDBLite consensus disorder prediction 51 75 - -
Lele39g1400 699 MobiDBLite consensus disorder prediction 1 90 - -
Lele39g1400 699 Gene3D Glycosidases 253 698 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1400 Lele-ChrLele39 22224859 22229892 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g1400 1 696 Glycoside Hydrolase AT2G45880 66.381 0.0 961
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Lele39g1400 Glyco_hydro_14 2.6e-101 CL0058