Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1397 ATGTCTGAATTTCTGAAATCCATCATCCTGATACTATCAGCTCTTGCGTTGGCTTCAAACTTGGTCGAAGCGAAAATACACGTGAGGATGACCAACATGTTAGATAATAATTTGAACTTGACTACTCACTGCAAATCCAAAGATGACGACCTCGGGGAGCATCTTCTTCACCATTTAGAAACTTTTGAGTTCGGTTTCAACCCCAATATTTTTGGAACAACTCTATTCTATTGTAGCTTTCAATGGGAAGGAGCTTTCAAGTGGTTCGATATATACGATAATAAAAGGGATGCATGTACTACGGGGCATTGCAATTGGAAAATTAAGAAAGATGAAGTATGTTTCAATAATGGCGACCGTGAGGTTTCAGTTCGTTATCCATACAATAAGCAAGCATGA 399 0.386 MSEFLKSIILILSALALASNLVEAKIHVRMTNMLDNNLNLTTHCKSKDDDLGEHLLHHLETFEFGFNPNIFGTTLFYCSFQWEGAFKWFDIYDNKRDACTTGHCNWKIKKDEVCFNNGDREVSVRYPYNKQA 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1397 132 Pfam Plant self-incompatibility protein S1 27 126 IPR010264 -
Lele39g1397 132 PANTHER - 22 119 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1397 Lele-ChrLele39 22215811 22216209 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g1397 18 132 Carbohydrate Esterase AT3G16970 38.525 5.79e-22 83.2