Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1396 ATGCCTCGGGGATTTCAGCAAAACATAGGCCCGTTAATACTGACGGTGGTGGTGGTGGTGTTGGCATCATCAAACGCGAACGGAGCTCATGGGTTCCTAATGTTGGTGAAAACGCACGTCAAAGTGTTCAACTATTTACAGAACCATAAGGATCTGATCCTTCATTGCAAGTCAAAAGACGACGATCTTCAAGCTCATCGTCTTCGTTATGGCGAGCACTTCGAGTGGTCCTTCCGCTTGAATTTCTTAGGGAGGACACAGTACTACTGCAGCTTTCAATGGCCTGGTGCTCTCAAATGGTTTGATATATACATTGGTTGGAGAGACGATAGGCTTTGAATTCTTGAAGTTCTTCTGGTCTATGCTAAAGGCATCAAACACACCCACCTTATTGGAAAGCCATCCTATTATGTGATTCTTGAATGTGGAACTCAATCTCAGAGAAGTAAAATATCATCAGGAAAAGATGAGAAAACTTGGTGGAATCAGAAATTCACATTTGAATTCCCATCATTTGATGATAGTAAGAAATTAAACCAACTCAAGTGTACAATCGTGGACACACAGCTCTTTACAAATGGAGGATTTGTGGGTGAATCCAGAATTTACATAGGAAGAATAATCTCAGAAGGGACAGAGAAAGGATATATAGAAATAAAACCAGCTCCATACAATGTGGTGCTTGAAGATGACACCTACAAAGGACAAATAAAAATTGGATTTAAACTCTTCGTAAATAAAGAAAAGCATGATATTGAAGCAGGAGAATCAAATGCTAAAGAGAAAGAAACAGGTCGTCGTTCCATCATTGGATCCATTTTAAAGTTGTGGAGAATATCATGGTACAAAATCCTCTTTTTATACAATAATGTAAAGATTACCAAAGACAAAGATTATAAGAGAAATTAG 909 0.3861 MPRGFQQNIGPLILTVVVVVLASSNANGAHGFLMLVKTHVKVFNYLQNHKDLILHCKSKDDDLQAHRLRYGEHFEWSFRLNFLGRTQYYCSFQWPGALKWFDIYIGWRDDRLXILEVLLVYAKGIKHTHLIGKPSYYVILECGTQSQRSKISSGKDEKTWWNQKFTFEFPSFDDSKKLNQLKCTIVDTQLFTNGGFVGESRIYIGRIISEGTEKGYIEIKPAPYNVVLEDDTYKGQIKIGFKLFVNKEKHDIEAGESNAKEKETGRRSIIGSILKLWRISWYKILFLYNNVKITKDKDYKRN 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1396 302 Pfam C2 domain 114 214 IPR000008 -
Lele39g1396 302 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 112 242 IPR035892 -
Lele39g1396 302 Pfam Plant self-incompatibility protein S1 39 110 IPR010264 -
Lele39g1396 302 ProSiteProfiles C2 domain profile. 94 217 IPR000008 -
Lele39g1396 302 PANTHER C2 DOMAIN-CONTAINING 114 265 - -
Lele39g1396 302 Gene3D C2 domain 113 244 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1396 Lele-ChrLele39 22211359 22214265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g1396 37 109 Carbohydrate Esterase AT3G16970 39.726 8.35e-11 57.4