Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1387 ATGTCCTCAGTAGCTGATTACATGGATAAGGAGCAATCCCCCAAAATTACCAGAAGAACAACCAGATCTTTGGCTTCGGCATCTGCTTCAAATAACACCGTGAATGAAGTAACTAATGTCGGTCCTCCTCCAGCAATAAATCATCTCATAGTTGAAGGAGATCCAGAAGTGGATAAGGAGGGAACCCCACAAATTCCCAGAAGAACAACCAGATCTTTAGCTTCAGCGTCCAATTCAGATAATGTTGCAACAAAAGTAACTAGCATTGACCCTCCTACAATAAATGACCTTTTAGTTGGAGGAGATCCCATTAGTCTGGATGATTTAACATCCACTTTTCCCGGTAGAGGTAGCCAGATTCTTGAGCTTGTGCGTCTTTTGGGACCTTTGAATTCACCTATATTGCCTTTATTGGTGTATGGTAGTCCTTCTACAGGAAAAACCAGCATCATTCTTCAATTGTTTAGGCATCTCAACAGGCCTCTCGTTTATTCTAGCTGTAGCACATGCTATAATCAGCGGATCTTGTTTGAATCTATTTTGAATTCATTGTTTCTTCATAGAAAAAGTGCTGCCAATGGTTATTCAAATGCAAAACGATGTGAAAGACCATCTGACTTTGTCAATTTTCTGAGGGAAGCATTGGCCAATGTGATAAATAATCTGAAGGCAAATTCAGAGAAATTGAGATCAAATAAGATGGCAGCAAGGGGAATTGGAAATATGATTTACTTGGTATTCGACAATTTTCATCTTGTTAGGGAGTGGGATAAAAGTTCTACTATATTGCCCTTCCTGTTTAATCTCTATGATCTGCTAAATATGCCAGAGGTAGGCTTGATTTTCATTAGCAGTACTTCCCCTGATACCTATTATGCTAATATGGGTTATGTAGAACCTGTCCCTGTCTTCTTTCCTGATTATACTGAGGATGATCTTCATAAAATATTCTTGAGAAACCAAGCAAACCAAAAGTTGTATTCTTCATTTCTGGGTGTAGTTTTGAGGCCTTTCTGCAGAATTACAAGACAGGTGGATGAATTGTTTACCGCCTTCAAGTCCCTATTTGAAAAATATTGTGAACCTTTAAGTGATCATGGTGTTGTTCCGAGCGAAGACATGAAGAGAAGGTTATTTAGCCATCTAAAGCCTCATATTGGTTCCTATTTGAATGAAATATTGAAGGTTTCATCTCGTCCTTCACTTGAAGTTGAGACCCATAAAGGGACCAAACGGAAGGGGAATCCCAAGAAATTGGAGAGATCTGAAGAAATTGAAGAGCTGGAATTTCACATGTCTACTTGTGCTAAATATCTCCTTATTTCTGCATTTCTTGCATCCCGAAACCCTGCGACCCTTGATGACTCACTTTTTGATTCGACTGGCGGTTCAAACAGTCAAAAGCGTAAGAGGAAGACCTCTACAAAAGCGCAGGAACAGAAACAAATCGCTGAAGAGGAACTACTAATGAAAGGACCTGGAACTTTTCCACTAGAGAGGTTGTTAGCCATCTTCCAGTGTATTGTGTCGGTTGCTGAAGATCCATCTGATGAAGAGGAACAAAAGAATGATGGATTAGCAATCCAAAGTGGCAATGGTGGGCTAATGTCCGACGTTCTTTTACAGCTATCTAGTCTCTGCAATGCTAATTTTATTATTAAAGGAGGAAGCTGTCCTATAGAAGGCTCAACTCGGTATCGATCTACTATATCTGAAGACCTGGCTTTGAAGGTTGCAAGGAGCCTTAAATTCCCGCTGTCAAAGTATTTGTACAGAAGATAA 1782 0.3984 MSSVADYMDKEQSPKITRRTTRSLASASASNNTVNEVTNVGPPPAINHLIVEGDPEVDKEGTPQIPRRTTRSLASASNSDNVATKVTSIDPPTINDLLVGGDPISLDDLTSTFPGRGSQILELVRLLGPLNSPILPLLVYGSPSTGKTSIILQLFRHLNRPLVYSSCSTCYNQRILFESILNSLFLHRKSAANGYSNAKRCERPSDFVNFLREALANVINNLKANSEKLRSNKMAARGIGNMIYLVFDNFHLVREWDKSSTILPFLFNLYDLLNMPEVGLIFISSTSPDTYYANMGYVEPVPVFFPDYTEDDLHKIFLRNQANQKLYSSFLGVVLRPFCRITRQVDELFTAFKSLFEKYCEPLSDHGVVPSEDMKRRLFSHLKPHIGSYLNEILKVSSRPSLEVETHKGTKRKGNPKKLERSEEIEELEFHMSTCAKYLLISAFLASRNPATLDDSLFDSTGGSNSQKRKRKTSTKAQEQKQIAEEELLMKGPGTFPLERLLAIFQCIVSVAEDPSDEEEQKNDGLAIQSGNGGLMSDVLLQLSSLCNANFIIKGGSCPIEGSTRYRSTISEDLALKVARSLKFPLSKYLYRR 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1387 593 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 105 592 IPR020796 GO:0000808|GO:0005634|GO:0006260
Lele39g1387 593 MobiDBLite consensus disorder prediction 455 488 - -
Lele39g1387 593 FunFam Origin of replication complex subunit 5 113 294 - -
Lele39g1387 593 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 110 376 IPR027417 -
Lele39g1387 593 MobiDBLite consensus disorder prediction 472 486 - -
Lele39g1387 593 MobiDBLite consensus disorder prediction 401 420 - -
Lele39g1387 593 Pfam AAA ATPase domain 113 269 IPR041664 -
Lele39g1387 593 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 303 590 IPR020796 GO:0000808|GO:0005634|GO:0006260
Lele39g1387 593 Gene3D - 113 291 IPR027417 -
Lele39g1387 593 MobiDBLite consensus disorder prediction 1 79 - -
Lele39g1387 593 MobiDBLite consensus disorder prediction 18 40 - -
Lele39g1387 593 Coils Coil 212 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1387 Lele-ChrLele39 22125062 22127429 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g1387 59 593 Core DNA Replication Machinery Family AT4G29910 59.480 0.0 655