Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1383 ATGGTCACTTCAAAGACACTGCATGATTACCCAAAATCTCTGTGCTTTTGGTTTATTTTGCCACAAGTCTTAGAATCTGAATTCCAGCTCAATGATATGATCAAGCATAACTTGGATAGAACTTCCTACTCTATTAGCACCAATACTATACGGGTCTCCTCATTTAAAGTTGGGGTTATAGCTATTTCTTTTATTAGAGTCTTGGGTAATCTGTTGTTAGGAGATTCTAGCTGGATTACTTTCAATTCACACAATGGCTTGCGTGTGCAGATTGTCATTCGTTGTCACAGAATTCCAGAAAATTTAAATGTACCTTTCGTTTTGGTTTCTTTGACTGCTGTATGTGGACTTACACATGGTTTTCTTATTCCAGTTGATTTGCCGACATCGTTTTCTGCAGTGTCGATAGCATTGCACTCAGATGTAGACCTTGATGTGACAAAAGTGGAAAAGGTTCCACAAAGCATGCTGCCAGTAGCATGTTTTAGAGATGGCAGCCCTCCACTGCCTGATGCCTCAAACATTTCCCTGAAAGAGCCAACCATCTCAGGTGGGCCTTTAGCTTGTTCGCCAGTTCTCCGTCTACTTCTCTATCTTCCTCGTTTTGAAAGGAAAGGCAAATCAATATGTATCAGAATGAATAATCTTTTTGTGGAGCAGTGGTTTCCCATGCAGAAAAATATTACTTTGAGATTGACAAACGAGCAGATATCTCCAGGTGTTTGGTACATTGGTCTTTTCAATGGCATTGGACCTGCTAGGACACAGTCAAAAATGCTTCCTCATGCTATTACTCTTAGCAAAGGTTCCTACAACATGCTGATGAACGGCAGGTACTGGCTTGTCCCTGCAGATTATCCGAGTACAGTCTATCCTCTCTCATGCACAAGGCCTGATGACGTCTTTGATGCTTCTGATGATGTGGCTGATGGTGAAGCAAAAGCCTACTCCTTGGATATAATGAATATGGTGGAAGAGTTGAGCATTATGGCCACAAATGTCAGTTTCAATTCCATTTCATCAACTAATGGCGCAAATGATGTCAATCTAATGTGTTTTGTTCGCCATGGAGCAATGCCTTCTGCGACTTTGCATGATTGTTCCAGTAATTTATATAAAGTTCCTTTGACTATACGATCACCACTGATTGGTCGTTGGTACATTATCATAGTACCACTTAATCTTACAAGAAAAACTGGAGACGCTGCGGATAGTGATGTAAGAACCTGCTATTCAATGGAATCACATTTGTCTGAATGCCCATTTGGAAAAGCTGGACCAAATTGCACAATGGCAAGAGGTATAAGCCCCTTTGAATCATATTATTTACCAATTGGTGGAGAAGCGTCCTCTGATTCTGCCAAGTTTCCTCTTGAACCACTTTTAAGCAGCTCACCAAATGGCGGGGAACCTGACAACTTATGGACTTTCTTTACTATGGATATTCCTCGTGGTGCGGCCGGAGGAAATATCCACGTACATCTATCCTCAAATGCGAAGATCGGTCACCAAGTATATGCTAGATTTGGTGGATTGCCATCTATTGATAGCTGGGACTATTATTATGCAAACAAGTCAAGGAGAAGTGACCTATCTATGTTTTTTATGCTATATGATTCAAGAGATGACAAAGTTATATGTGATCATGATCATATCAAAGGATACAAATGGCATATAAGGCAATCGATTTTTCTCATTGCATCAAATGCTGCAGCCATACTTCCTGCTTTTTGGGCCCTTCGGCAGAAGGCGTGGGCAGAGTGGATTATATACACAGCTAGTGGAATTTCACGTGGATTATATCATGGTTGTGATGTTGGCACCTGGTGTGCATTGAACTACAATGCCTTACAGATATTACGGTGCCCTGAGGACTGTTTACATGACAACTTTCAGTTCATGGACTTCTGGCTCTCTTTCGTGGCTGTGATTAGCACTTTTGTATACCTAGCTACCATTAGTGAGGCCTTTAAGAGGGCAATTCATACTGCTGTTGCCATCCTTACAGCTCTCATGGCTGTTACCAATGCAACCAGATCTTCGAATATTATTCTTGTGATAGTAATTGGGACTATTGGGTCTTTCTCATTTGGAGTCCTGTCGAATTTCCATCAGAGCTTGCAAGCTATAGAGCAATGGCTCTATAATCTTGTCGAGACACTTCTGAGACGGTTCCGGTGGGGTTTTGTGCTCGCCGGTTTCGCGGCATTGGCCATGGCAGCAACAAGCTGGACACTTGAAACCAGTGAAACCTACTGATTGGTAATTGGATTTTCCTCCTTCTTTATCAAACTATTGGCTTGTGTAGTATCCACTGGCGCGCAAGTTTGCATTAGGGTTTGTTCTGTGAATTTCGGAACTGAATTCCATCGCCTGGTTTCGCTGTTTGACCCTTTTCTTGCTTTATTTCTTGGGTTATTCATTTTTCTTCTTGTTGCTCGAGTTTTCTGTAAACAGCTGCACTGCTGGAAAATGGGAGGCTGCTGCTGTTCTGCCAGAAAACCTCATCTACATGGTACACCAGTGTATTATTATTGCCCGCCAGCTTTGGAAGAGCGCGAATCATTAACCTTGAATGATGGTACGGCTGCTTCACACGGTGCTGGATTCCTAGCAGGTTTGAACTTGGAAACATCCACGCCAGATACATACCGGCCCCCTCCTGCACCTTTGCCATATGATGTTGTCTTTGGTCCAATATCAACAGATTCTGAATCTGGAAGAAAAACAGGTAGTGGTAGTAGTATTGAAACATTAATTACGGGTGAAGATCCTGAACAATCGGATTGCAAAGCTCAATCAAATTCTGAACTTTTGTCTCCAAGAAAGATAGAACTATCAAAGTCAAATGAATGCCATGTATTAATGACAGAAGAAGAAGTCTGTCCAATTTGTCTTGAAGAATATGAGGTTGAGAATCCTAAAACTCTGACAAAGTGTGAACACCATTTTCACCTATCTTGCATTCTTGAGTGGATGGAAAGAAGTGACACCTGTCCTATATGTGATCAGAAGCGAGTCCCGCTTCTTTCTATCTTTCTCTTCTATCCAATTGACACTTGTTTTAGAGGTTCCATTACTGGTTACTGGGGGGAGAAGAACGAGATTTTGACAGTGTTCCCCCATATGGGAATTTCTCTTATAAATGAAAGAATTCCGCAAATGCTCGAGGCAGAGATTCGGATCGATACAGAGAATGGGTCACTCAAAATGGCAGAGGAGAGAATAAGTTCATCCTCTGGTGAAGAGAGTGAGCCACCAGTGACCAATGGCAGCACCACCTTGCAGACGGCGGAGCTCCACCATGCTCCGGCGGGTCTGATTCAGACGAATGCAGCAGATTATCCTCCAATAAATACCTTCCAAGACGTGAAATATGTGTGCTCTGTGGAAACCGCAAAGGTTTGGGCTATTGCAGGCCCCATCGCTTTTAATATCCTCTGCAATTATGGCATCAATTCTTTCACCAACATCTTCGTAGGACATATTGGAGAGATAGAATTATCTGCTGTAGCCATTGCTCTCTCCGTCGTTTCAAACTTCTCTTTCGGCTTCTTGCTTGGCATGGGAAGTGCACTGGAGACATTATGCGGGCAAGCATTTGGAGCAGGGCAAGTAGAAATGCTAGGAGTGTACATGCAACGTTCGTGGATAATCCTAGGAGCCGCATGTTTCTTTCTGCTTCCTCTTTACATTTTTGCTAAGCCAATTCTGATCCTGCTAGGCCAAGAACATGACATCGCAGTTCTAGCAGGAACATTCACGGTCCAAACAATCCCTCAAATGTTCTCTCTTGCCATCAACTTCCCTACCCAGAAGTTCCTGCAAGCACAGAGCAAAGTGGGAGTTCTTGCTTGGATTGGCTTCGCCGCGGTTTTCTTTCATATCGGGATTCTCTATCTGTTCATCAGAGTGTTTGGTTGGGGCACAAGTGGTGCTGCTGCAGCCTATGATATATCTGCTTGGGGGATTGCTTTGGCTCAAGTGGCTTATGTGGTTGGTTGGTGCGATGAAGGTTGGAGAGGCTTTTCATGGCTCGCTTTTAAGGATCTTTGGGCATTTGTCAAGTTGTCCATTGCCTCTGCTATCATGCTTTGTTTGGAGATTTGGTACTTCATGACCATTATTGTTCTCACCGGTCACCTTGACAATCCGGTTATCGCCGTTGGCTCGCTTTCTATATGCATGAATGTGAATGGGTGGGAAGGCATGCTGTTCATAGGGATCAATGCAGCTATAAGTGTGAGGGTTTCCAATGAGCTAGGATCAGGACACCCAAGAGCTGCGAAGTTCTCAGTTATCGTCACGGTGATCGAGTCCCTGTTCATAGGGATCCTTTGTGGAGCCATTATTCTGATCACAAAAGATGATTTTGCTGTCATCTTCACTGACAGTGCAGAGATGAAGAAAGCAGTTTCTCATCTTGCTTCCCTTCTTGGCGCAACCATGGTTCTAAATAGTGTTCAACCAGTTATATCAGGTGTTGCTGTAGGAGGAGGTTGGCAGGCTTTGGTAGCTTACATAAACCTATTCTGTTATTACATAATTGGACTCCCCCTTGGCTTTTTTCTTGGTTACAAAATGGGTTTAAGAGTAGAGGGCATTTGGATAGGCATGATATGTGGGACATTGTTGCAGACAATGATATTATTGTACATTATATATAAAACTAATTGGAATGAAGAGGTGGAACAAGCAACAGAAAGAATGAGAAGATGGACTGGACAAGAATTTGAACTTGCTTCCTCATAA 4752 0.4293 MVTSKTLHDYPKSLCFWFILPQVLESEFQLNDMIKHNLDRTSYSISTNTIRVSSFKVGVIAISFIRVLGNLLLGDSSWITFNSHNGLRVQIVIRCHRIPENLNVPFVLVSLTAVCGLTHGFLIPVDLPTSFSAVSIALHSDVDLDVTKVEKVPQSMLPVACFRDGSPPLPDASNISLKEPTISGGPLACSPVLRLLLYLPRFERKGKSICIRMNNLFVEQWFPMQKNITLRLTNEQISPGVWYIGLFNGIGPARTQSKMLPHAITLSKGSYNMLMNGRYWLVPADYPSTVYPLSCTRPDDVFDASDDVADGEAKAYSLDIMNMVEELSIMATNVSFNSISSTNGANDVNLMCFVRHGAMPSATLHDCSSNLYKVPLTIRSPLIGRWYIIIVPLNLTRKTGDAADSDVRTCYSMESHLSECPFGKAGPNCTMARGISPFESYYLPIGGEASSDSAKFPLEPLLSSSPNGGEPDNLWTFFTMDIPRGAAGGNIHVHLSSNAKIGHQVYARFGGLPSIDSWDYYYANKSRRSDLSMFFMLYDSRDDKVICDHDHIKGYKWHIRQSIFLIASNAAAILPAFWALRQKAWAEWIIYTASGISRGLYHGCDVGTWCALNYNALQILRCPEDCLHDNFQFMDFWLSFVAVISTFVYLATISEAFKRAIHTAVAILTALMAVTNATRSSNIILVIVIGTIGSFSFGVLSNFHQSLQAIEQWLYNLVETLLRRFRWGFVLAGFAALAMAATSWTLETSETYXLVIGFSSFFIKLLACVVSTGAQVCIRVCSVNFGTEFHRLVSLFDPFLALFLGLFIFLLVARVFCKQLHCWKMGGCCCSARKPHLHGTPVYYYCPPALEERESLTLNDGTAASHGAGFLAGLNLETSTPDTYRPPPAPLPYDVVFGPISTDSESGRKTGSGSSIETLITGEDPEQSDCKAQSNSELLSPRKIELSKSNECHVLMTEEEVCPICLEEYEVENPKTLTKCEHHFHLSCILEWMERSDTCPICDQKRVPLLSIFLFYPIDTCFRGSITGYWGEKNEILTVFPHMGISLINERIPQMLEAEIRIDTENGSLKMAEERISSSSGEESEPPVTNGSTTLQTAELHHAPAGLIQTNAADYPPINTFQDVKYVCSVETAKVWAIAGPIAFNILCNYGINSFTNIFVGHIGEIELSAVAIALSVVSNFSFGFLLGMGSALETLCGQAFGAGQVEMLGVYMQRSWIILGAACFFLLPLYIFAKPILILLGQEHDIAVLAGTFTVQTIPQMFSLAINFPTQKFLQAQSKVGVLAWIGFAAVFFHIGILYLFIRVFGWGTSGAAAAYDISAWGIALAQVAYVVGWCDEGWRGFSWLAFKDLWAFVKLSIASAIMLCLEIWYFMTIIVLTGHLDNPVIAVGSLSICMNVNGWEGMLFIGINAAISVRVSNELGSGHPRAAKFSVIVTVIESLFIGILCGAIILITKDDFAVIFTDSAEMKKAVSHLASLLGATMVLNSVQPVISGVAVGGGWQALVAYINLFCYYIIGLPLGFFLGYKMGLRVEGIWIGMICGTLLQTMILLYIIYKTNWNEEVEQATERMRRWTGQEFELASS 1583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1383 1583 MobiDBLite consensus disorder prediction 901 920 - -
Lele39g1383 1583 CDD RING-H2_EL5_like 961 1002 - -
Lele39g1383 1583 SUPERFAMILY RING/U-box 953 1009 - -
Lele39g1383 1583 CDD MATE_eukaryotic 1131 1565 IPR045069 GO:0042910|GO:1990961
Lele39g1383 1583 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 955 1009 IPR013083 -
Lele39g1383 1583 SMART ring_2 962 1002 IPR001841 -
Lele39g1383 1583 ProSiteProfiles Zinc finger RING-type profile. 962 1003 IPR001841 -
Lele39g1383 1583 TIGRFAM matE: MATE efflux family protein 1141 1536 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lele39g1383 1583 Coils Coil 1556 1576 - -
Lele39g1383 1583 MobiDBLite consensus disorder prediction 1071 1094 - -
Lele39g1383 1583 PANTHER MULTIDRUG RESISTANCE PROTEIN 1126 1559 - -
Lele39g1383 1583 MobiDBLite consensus disorder prediction 903 920 - -
Lele39g1383 1583 FunFam Putative E3 ubiquitin-protein ligase RHB1A 939 1007 - -
Lele39g1383 1583 Pfam Protein of unknown function (DUF3522) 558 755 IPR021910 GO:0016020
Lele39g1383 1583 Pfam MatE 1141 1301 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lele39g1383 1583 Pfam MatE 1361 1522 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lele39g1383 1583 Pfam Ring finger domain 962 1002 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1383 Lele-ChrLele39 22080222 22095300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g1383 825 1007 C3H Transcription Factor Family AT4G00335 56.216 1.00e-64 216