Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1380 ATGTCAGTCTACGATGCAGCTTTCGTGGATACAGAGCTCTCCAAGAAGACCTCAATCTTTGGTCTCCGACTATGGGTTGTGATCGGAATCCTCGTCGGTTCTATTATCGTGCTCTCTCTCTTCCTGCTCTCGCTCTGCCTCACCTCTCGCCGCCAGAGACGTAAAGAAAACCCTCAAGCCAACAAAACACCTGTCGTTTCGAAGGAAATCCAGGAGATCGTGCACCTGCCCTTACCCAATCAGCACTCAGCCCCCGAGATCCAAGTGGATTTCGGGAAAGCGGAGCACCGGGTCGTGGTTTACTCCGATCGGGTCTCTAGTGGAGAGAGCAAGGGAGGCGCCACCAGTGTGTATGAAACGACGTCCTCTTTTGGGAGTGGGAGTATTGGGCCTGAGGTTTCGCATCTTGGGTGGGGAAGATGGTACACCTTAAGGGAGCTGGAGGCTGCAACTAACAATCTGTGTGAGGAGAACGTTATTGGGCAAGGTGGATACGGCATCGTTTACCAAGGAGTGCTCGGTGATGGTACCAGAGTTGCAGTGAAGAACCTTTTGAATAACAAGGGTCAAGCTGAGAGAGAATTTAAAGTAGAGGTAGAAGCAATTGGTCGTGTGCGCCACAAGAATCTTGTTAGGTTGCTTGGCTACTGTGTTGAGGGGGCATACAGGATGCTTGTGTATGAGTATGTTGATAATGGCAATTTGGAACAGTGGCTTCATGGGGATGTTGGAGCTGTCAGCCCTTTGACATGGGATATCCGCATGAACATTATATTGGGAACTGCAAAGGGATTGGCCTATCTTCATGAGGGTCTTGAACCGAAGGTTGTCCACAGAGATGTGAAATCTAGCAACATACTCCTTAATCGGCAATGGAACGCCAAGGTTTCAGATTTTGGACTTGCAAAACTCTTGTGTTCTGAGCGGAGTTATGTCACCACCCGAGTAATGGGGACATTCGGTTACGTTGCTCCAGAATATGCCTGCACTGGTATGTTGACTGAGAAGAGCGATGTTTATAGCTTCGGAATACTCATCATGGAGATAATTACTGGGAGAAGTCCTGTTGATTATAGCAGACCACAAGGAGAGGTAAATCTAGTAGAGTGGTTGAAAGCAATGGTTGGGAATCGAAAGCCTGAGGAAGTAGTTGATCCTAAGCTCCCTGAGATGCCATCTTCAAAAGCTCTGAAGCGTGCTCTGTTGGTTGCTCTTCGATGTGTTGATCCTGATGCAACAAAAAGGCCTAAAATGGGACATGTGATCCACATGCTTGAGGCAGACGACCTCTTGTTCCGTGATGAACGCCGGATTGGAGGAGAATCTTCCAGCAACTCTCATCGTGGTGATCTCATACAAGAGCATAAGGACTCGAATTCTGAACAAAAGCTTGTAGGCAGAGGTACCACTAATCAACCTCAATATGATTATAGTAGGAGTCAGCATCAACCCAGTAGATGA 1461 0.4798 MSVYDAAFVDTELSKKTSIFGLRLWVVIGILVGSIIVLSLFLLSLCLTSRRQRRKENPQANKTPVVSKEIQEIVHLPLPNQHSAPEIQVDFGKAEHRVVVYSDRVSSGESKGGATSVYETTSSFGSGSIGPEVSHLGWGRWYTLRELEAATNNLCEENVIGQGGYGIVYQGVLGDGTRVAVKNLLNNKGQAEREFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVDNGNLEQWLHGDVGAVSPLTWDIRMNIILGTAKGLAYLHEGLEPKVVHRDVKSSNILLNRQWNAKVSDFGLAKLLCSERSYVTTRVMGTFGYVAPEYACTGMLTEKSDVYSFGILIMEIITGRSPVDYSRPQGEVNLVEWLKAMVGNRKPEEVVDPKLPEMPSSKALKRALLVALRCVDPDATKRPKMGHVIHMLEADDLLFRDERRIGGESSSNSHRGDLIQEHKDSNSEQKLVGRGTTNQPQYDYSRSQHQPSR 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1380 486 CDD STKc_IRAK 160 426 - -
Lele39g1380 486 ProSitePatterns Serine/Threonine protein kinases active-site signature. 276 288 IPR008271 GO:0004672|GO:0006468
Lele39g1380 486 SUPERFAMILY Protein kinase-like (PK-like) 132 426 IPR011009 -
Lele39g1380 486 FunFam Probable serine/threonine-protein kinase At1g01540 134 229 - -
Lele39g1380 486 ProSiteProfiles Protein kinase domain profile. 154 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g1380 486 MobiDBLite consensus disorder prediction 439 486 - -
Lele39g1380 486 MobiDBLite consensus disorder prediction 463 486 - -
Lele39g1380 486 Gene3D Transferase(Phosphotransferase) domain 1 230 437 - -
Lele39g1380 486 ProSitePatterns Protein kinases ATP-binding region signature. 160 182 IPR017441 GO:0005524
Lele39g1380 486 Gene3D Phosphorylase Kinase; domain 1 136 229 - -
Lele39g1380 486 SMART serkin_6 154 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g1380 486 MobiDBLite consensus disorder prediction 439 462 - -
Lele39g1380 486 Pfam Protein kinase domain 157 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g1380 486 FunFam Putative receptor-like serine/threonine-protein kinase 230 439 - -
Lele39g1380 486 PANTHER OS01G0323000 PROTEIN 8 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1380 Lele-ChrLele39 22063904 22066051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g1380 26 426 Trihelix Transcription Factor Family AT5G38560 40.732 4.51e-95 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Lele39g1380 Pkinase 2.6e-46 CL0016