Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1377 ATGGTGTCGTTAAATCCGAACCCAGTTCAAGGCTTCTACTTCTCCGATCCCACCAAGATGGGGCTTCCCGGTGTCAATCCTACTCCGCCGCCTCCGGCTACTGCTACGGCTTCTTCGTCCACTTCCAGCACCGTAGGCGTCAGTAAGGCTTCGTACGGGGAGGATCTGAGTAAGAAGATCCGAAAACCATACACGATTACCAAGTCCAGGGAGAGCTGGACGGAGCAGGAGCACGACAAGTTTCTCGAAGCTCTCCAATTATTTGACCGTGATTGGAAGAAGATTGAAGCATTTGTTGGCTCAAAAACTGTTATCCAGATACGAAGTCATGCACAGAAATATTTCCTGAAAGTTCAGAAGAATGGAACAAGTGAACATGTGCCTCCCCCTCGGCCAAAAAGAAAGGCTGCTCATCCATACCCACAAAAGGCACCTAAAAATGCTCCAGCGGTATCCCAAGTTACAATGCCATTGCAATCTTCATCTTCTTTCATGGAGCCCTCATACATTTATTGGCCCGATGCATCATCTGCACTTGGAACTCCAATTACCAGTGTGCCTGTGTCAAATTGGAATTGTAATGTTGTCCCACTACCCAGTTTGCCTCAAGCGACTAGAGATGAGATAGGATTGCCTGGTCAAGCTGCTTCTCTAAATTGTTGCTATAGCAGTAGTAATGAGAGCACTCCAAGGGCTTGTCCAGGTAGCAAAGTTATTGATCAAGGGAACTCAGGCAAGCCGATGAAAGGTTGGCTGGCTTCTTTACTTCATTTGAGCTCAAGTTGA 786 0.4733 MVSLNPNPVQGFYFSDPTKMGLPGVNPTPPPPATATASSSTSSTVGVSKASYGEDLSKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKAAHPYPQKAPKNAPAVSQVTMPLQSSSSFMEPSYIYWPDASSALGTPITSVPVSNWNCNVVPLPSLPQATRDEIGLPGQAASLNCCYSSSNESTPRACPGSKVIDQGNSGKPMKGWLASLLHLSSS 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1377 261 CDD SANT 72 115 IPR001005 -
Lele39g1377 261 PANTHER SWI/SNF COMPLEX-RELATED 34 199 - -
Lele39g1377 261 MobiDBLite consensus disorder prediction 35 50 - -
Lele39g1377 261 SMART sant 69 117 IPR001005 -
Lele39g1377 261 MobiDBLite consensus disorder prediction 15 52 - -
Lele39g1377 261 SUPERFAMILY Homeodomain-like 64 120 IPR009057 -
Lele39g1377 261 Pfam Myb-like DNA-binding domain 70 115 IPR001005 -
Lele39g1377 261 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 68 117 IPR006447 GO:0003677
Lele39g1377 261 MobiDBLite consensus disorder prediction 120 152 - -
Lele39g1377 261 Gene3D - 73 120 - -
Lele39g1377 261 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 119 IPR017930 -
Lele39g1377 261 FunFam protein REVEILLE 6 isoform X1 72 120 - -
Lele39g1377 261 ProSiteProfiles Myb-like domain profile. 65 115 IPR001005 -
Lele39g1377 261 ProSiteProfiles SANT domain profile. 68 121 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1377 Lele-ChrLele39 22042397 22044990 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele39g1377 Myb_DNA-binding 1.9e-11 CL0123