Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1362 ATGGGAAACAGTGAGGAAGGGCAATCAACTAAAACTGAAAAACCTTCTTCACCTGTAGCATTGGACCAGGCTAGTCGGGGCAGCCAGACCAACATTCATGTCTATCCTGATTGGGCAGCCATGCAGGCATATTATGGGCCAAGAGTCTCCATACCGCCGTACTACAACCCAGCTGTGAGTTCTGGTCACCCTCACCCATACATGTGGCCACCACAGCCCATGATGCCACCACCATATGGGAATCCTTATGCAGCAATTTATTCACATGGAGGCGTTTATCCTCACCCTGCAATTCCTATAGGGCCACAATCACACGGTCAAGGAGTTCCAACCTCACCTGCTGCTGTAACTCCTTTGAACATGGAGGGCCCAACAAAATCTTCTGGAAACAGTGATCAGGGTTTAATGAAGAAATTGAAGGGGTTCGATGGGCTTGCAATGTCTATTGGAAATGGCAATGCTGAAAGTGCTGACCGTGGAGCAGAAAACAGGCTGTCACAGAGTTTGGATACCGGAAGTTACAGTGACGGAAGTGACAGCAACACTGCAGGGGCTAATCAAACAAGAAAGAAAAGAAGCCGTGAAGGAACACCAGCTACTGATGGAGATGGCAAAACTGGGAGACAGGCAAATCCAGTTTCCAAAGCTGCTAGAGCCTCCAATGTTGTAGGAACAGTAGTTGGACCTGTAATTTCTTCTGGTATGACAACAGCATTGGGGCTGAGGAAAACAGATTCCCCGGGTAATCCACAGCCTTGTTCAGTAGTGCCACCTGAAGCTTGGACACAGAATGAACGTGAGCTGAAACGGGAGAGGAGAAAGCAATCAAATAGGGAATCTGCTAGACGGTCCCGGTTAAGAAAGCAGGCTGAGACTGAAGAACTTGCACGAAAAGTTGAATCCTTGACATCTGAGAATATTACACTGAAATCAGAAATAAATCGATTGACCGAAAGTTCAGGAAAGATTAAGATGGAAAATGAGACATTAATGGAAAAACTGAAAAATGCGGGAGGAGAAAAGGATGGAATCATCTTGACACCGAGTACAGAAAATTTGCTATCCAGGGTTAACAATTCCAGTTCTTGTGACAATAGAACTATAGAGGGTGAGAGCGCTTTATGTGAGAAGAAGCCAAACGCAGGAGGAGCAAAGCTGCATCAACTATTGGACACGAGTCCTAGAACTGATGCTGTGGCAGCTGGCTGA 1209 0.4648 MGNSEEGQSTKTEKPSSPVALDQASRGSQTNIHVYPDWAAMQAYYGPRVSIPPYYNPAVSSGHPHPYMWPPQPMMPPPYGNPYAAIYSHGGVYPHPAIPIGPQSHGQGVPTSPAAVTPLNMEGPTKSSGNSDQGLMKKLKGFDGLAMSIGNGNAESADRGAENRLSQSLDTGSYSDGSDSNTAGANQTRKKRSREGTPATDGDGKTGRQANPVSKAARASNVVGTVVGPVISSGMTTALGLRKTDSPGNPQPCSVVPPEAWTQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLTSENITLKSEINRLTESSGKIKMENETLMEKLKNAGGEKDGIILTPSTENLLSRVNNSSSCDNRTIEGESALCEKKPNAGGAKLHQLLDTSPRTDAVAAG 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1362 402 MobiDBLite consensus disorder prediction 153 226 - -
Lele39g1362 402 Pfam G-box binding protein MFMR 1 99 IPR012900 -
Lele39g1362 402 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 367 IPR044827 GO:0003700|GO:0006355|GO:0043565
Lele39g1362 402 MobiDBLite consensus disorder prediction 263 293 - -
Lele39g1362 402 SMART brlzneu 265 329 IPR004827 GO:0003700|GO:0006355
Lele39g1362 402 MobiDBLite consensus disorder prediction 1 32 - -
Lele39g1362 402 Coils Coil 285 319 - -
Lele39g1362 402 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 267 330 IPR004827 GO:0003700|GO:0006355
Lele39g1362 402 Gene3D - 268 322 - -
Lele39g1362 402 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 272 287 IPR004827 GO:0003700|GO:0006355
Lele39g1362 402 MobiDBLite consensus disorder prediction 379 402 - -
Lele39g1362 402 MobiDBLite consensus disorder prediction 160 187 - -
Lele39g1362 402 SUPERFAMILY Leucine zipper domain 268 320 IPR046347 GO:0003700|GO:0006355
Lele39g1362 402 MobiDBLite consensus disorder prediction 238 293 - -
Lele39g1362 402 Pfam Disordered region downstream of MFMR 132 246 - -
Lele39g1362 402 FunFam G-box binding factor 3 268 323 - -
Lele39g1362 402 Pfam bZIP transcription factor 265 328 IPR004827 GO:0003700|GO:0006355
Lele39g1362 402 CDD bZIP_plant_GBF1 270 318 IPR045314 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1362 Lele-ChrLele39 21937852 21941367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g1362 1 402 bZIP Transcription Factor Family AT2G46270 52.451 6.05e-113 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele39g1362 MFMR_assoc 3.8e-16 No_clan