Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1344 ATGTGGAGACTGGTTGGGGGTGTTCTTCGTTCCATGTTGTTTGGAAGTTTTGAATGGATTGACTGTGCTTCAGGTCATGCAAGGATTGACACCCTTGCTTTAAGTCACAGCCAATTGCAGGAGGCAGCCTCAATCGTCAGCGGTGTCTCATCCTCACGCTCCACGTGTCATGTGGACAGTGGTCGAATTCTTAATTATGCTATGGAGGCCCTCAATGCTGCTACCTTGACCCCTTTATCAGTTCTCTGCGATAAAAGAAAACAACCCAGAAAATTCTCATCACTGTCCAGAATTTCCGTTAGCAAAGTCTCAGATTCTGCCATTTTCCCCTCCAAGAAACCGTCTCTGAACGGGGATTTACCTGCAGGTTTACGTGGGGGCCTTCTTCTTGCAGCTTCAGTCATCAATGGAGGAATTGCTAAAGCTCTAACATATGAGGAGGCATTGGAGCAATCTTTGGGAAGCCCTACTAGTTCTGGGGATTTTGATGTAAATGGGCTTATAGATAGTGTCATAAGTTTTGGAACTGAGAACGCTTTGATTATAGCTGGAGGGTTGGCTATTTTGGGGCTGCCTCTGGTTTTGTCCCAGGTTCTGAACAAGCCTAAGCCATGGGGTGTTGAGTCAGCTAAAAATGCATATGCAAAGCTTGGTGCTGATGGGGATGCTCAATTGCTTGATATAAGAGCGCAAACGGAGTTTAGGCAAGTGGGTACTCCAGATGTTGGGGGTTTGAAGAAGAAGGCCGTGTCAATCACTTACAAAGCTGATGATAAACCTGGATTTTTGAAGAAGCTGGCTTTGAAGTTTAAGGAACCAGAAAATACTACATTGTTCATTCTGGACAAATTTGATGGGAACTCCGAATTGGTTGCAGAGTTGGTCACAGTCAATGGATTCAAAGCTGCCTATGCAATTAAGGATGGTGCCGAAGGACCACGTGGATGGATGAGTAGTGGTCTTCCATGGACACCACCAAGGAAAGCTTTGAGCTTGGATCTTGGCAACTTGACAGATTCTATCACTGGTGCAATAGGAGAGACCACTGATGGCTTGGCTCTAACTCTTGGGATTGCCGCAGCTACCGGTTTGGGGTTCTTAGCTTTTACTGAGATAGAAACAATTCTCCAACTTGTAGGTTCTGCTGCAACTGTTCAGTTTGCAAGCAAGAAGCTTCTATTTGCTGAGGATCGAAAGCGAACCCTGAAACAAGTTGACGAGTTCTTGTATACAAAGGTTGCCCCAAAGGAGCTCCTTGATGACATAGCGCAAATTGGAAAGGCTCTTCTTCCAACCTCCACCGAAAGTAAGGCTCTTCCTGCACCAACAGAGACAAGACCGGTACCTGAACCAGCTGCAAGTACTGTGCAGAAAGCAGAAGCCTCTCCTGATGCAGTCTCTGAGTCCAAAGTAGATGCAGCAGCTGAGCCTGTTCCTGAAGTAAATTCAGTACCCAAACCTGAAGTCAAGGCAGAATCAGTTCCTGGGATCCAAAGACCACTCTCACCATACCCATATTATCCGGATTTCAAGCCTCCAACATCCCCCACTCCCTCTCAGCCCTAG 1566 0.4655 MWRLVGGVLRSMLFGSFEWIDCASGHARIDTLALSHSQLQEAASIVSGVSSSRSTCHVDSGRILNYAMEALNAATLTPLSVLCDKRKQPRKFSSLSRISVSKVSDSAIFPSKKPSLNGDLPAGLRGGLLLAASVINGGIAKALTYEEALEQSLGSPTSSGDFDVNGLIDSVISFGTENALIIAGGLAILGLPLVLSQVLNKPKPWGVESAKNAYAKLGADGDAQLLDIRAQTEFRQVGTPDVGGLKKKAVSITYKADDKPGFLKKLALKFKEPENTTLFILDKFDGNSELVAELVTVNGFKAAYAIKDGAEGPRGWMSSGLPWTPPRKALSLDLGNLTDSITGAIGETTDGLALTLGIAAATGLGFLAFTEIETILQLVGSAATVQFASKKLLFAEDRKRTLKQVDEFLYTKVAPKELLDDIAQIGKALLPTSTESKALPAPTETRPVPEPAASTVQKAEASPDAVSESKVDAAAEPVPEVNSVPKPEVKAESVPGIQRPLSPYPYYPDFKPPTSPTPSQP 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1344 521 MobiDBLite consensus disorder prediction 434 521 - -
Lele39g1344 521 Gene3D - 205 335 IPR036873 -
Lele39g1344 521 MobiDBLite consensus disorder prediction 501 521 - -
Lele39g1344 521 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 205 325 IPR036873 -
Lele39g1344 521 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 68 521 IPR044240 -
Lele39g1344 521 FunFam Rhodanese-like domain-containing protein 4, chloroplastic 203 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1344 Lele-ChrLele39 21788816 21795312 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g1344 68 511 Sulfurtransferasese or Rhodanese AT4G01050 57.660 1.57e-159 461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g1344 39 21788816 21795312 Lele39g1344 39 21788816 21795312 ECH
Lele37g0084 37 682258 686297 Lele39g1344 39 21788816 21795312 hybridization
Lele38g0088 38 675543 679211 Lele39g1344 39 21788816 21795312 hybridization