Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1340 ATGTTTATTTTGTTTGGATTTGAAAAGTTAACACTGAATTACGTACAGATCTCTCTGAGAGATTCTATTGTGAACTCTGCAATTATGGGATTCGAACATCAATCATCAGAATACCCGAACCTCGACTCAATCTTAGTATCTGAGTTGCAAGACAATAAAGAAGCAATCGTGTGTTCCTACGCTTCATGGCTAGAAAAACATCCCTCTGCATTGGACAAATTTGAGGAAATGATGAGCATTGCTAAAGAAAAAGAGATTGTTGTGTTTTTGGACTATGATGGAACTCTCTCCCCCATCGTCGATGACCCTGATCGCGCTCATATGACCGATGCTATGCGCACAGCAGTAAATGAAGTTGCTTGTTGTTTTCCTACTGCAATTGTGAGTGGAAGGAGTAGAAAAAAGGTATGTGAATTTGTGAGGTTGAGGAATGTGTACTATGCTGGAAGTCATGGGATGGATATATCAACCCCAAAAGGCTCTTCCAAATCTGAAGACCAGAAACATCAGACTAATGCTGTTGATGAAAAGGGTAATCAAGTAGTTCACTTTCATCCCGCAGAAGAATTCCTTCCAACTATCAAGGAGATAATTAAGGTTCTGAAAGAGAATGTTCTGAGAGTAAAGGGGTCCAAGATAGAGGACAATATGTTCTGCATCACAGTTCACTACAGGCTTGTGAAAAATGAAAAGGAAGTTGGTATTCTCAGAAAGATGGTGGAGTCTATCATGGAAGCTTACCCTAATTTTCACATATCAGGAGGAAGAAAGATTATAGAGATACGCCCAAATATAAGTTGGGGTAAAGGTTGTGCTGTGCAGTATTTGCTGGGCACTCTTGGCTTTGACAGCTTTGACAACATCATACCACTCTACATAGGGGATGATGCAACTGATGAAGACGCTTTTAAGGTTATTAGAGACATTGGACAAGGTTTTGGGATCATAGTTTCTTCAAAAGCTAAGGAGACCAAAGCTTGTTATTCTCTGCGGGATCCTGATGATGTTTTGTCTTTCTTAAAACGTCTTGCTAAGTGGAGGAAAAGCTTGTCATGA 1056 0.3996 MFILFGFEKLTLNYVQISLRDSIVNSAIMGFEHQSSEYPNLDSILVSELQDNKEAIVCSYASWLEKHPSALDKFEEMMSIAKEKEIVVFLDYDGTLSPIVDDPDRAHMTDAMRTAVNEVACCFPTAIVSGRSRKKVCEFVRLRNVYYAGSHGMDISTPKGSSKSEDQKHQTNAVDEKGNQVVHFHPAEEFLPTIKEIIKVLKENVLRVKGSKIEDNMFCITVHYRLVKNEKEVGILRKMVESIMEAYPNFHISGGRKIIEIRPNISWGKGCAVQYLLGTLGFDSFDNIIPLYIGDDATDEDAFKVIRDIGQGFGIIVSSKAKETKACYSLRDPDDVLSFLKRLAKWRKSLS 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1340 351 CDD HAD_TPP 87 336 - -
Lele39g1340 351 Pfam Trehalose-phosphatase 89 333 IPR003337 GO:0003824|GO:0005992
Lele39g1340 351 TIGRFAM T6PP: trehalose-phosphatase 86 345 IPR003337 GO:0003824|GO:0005992
Lele39g1340 351 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 33 349 IPR044651 GO:0004805|GO:0005992
Lele39g1340 351 SUPERFAMILY HAD-like 87 346 IPR036412 -
Lele39g1340 351 Gene3D - 189 351 IPR023214 -
Lele39g1340 351 Gene3D - 86 185 IPR023214 -
Lele39g1340 351 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 88 309 IPR006379 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1340 Lele-ChrLele39 21751751 21755021 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g1340 82 344 Trehalose Biosynthesis Gene Families AT1G70290 25.000 5.47e-07 49.7