Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1324 ATGGAGCCAACACCTCCTCCCTGCAATCGCGAAGATGACCTAACAGCCGCCGTTTCCTCCGCCGCCATTGAGCCGGTTGACAAATCTGATAACTCACGAGTCGGAGGCACGCGCCACCCGGTCTACCGGGGTGTCCGTAAGCGGCGTTGGGGTAAATGGGTGTCGGAAATCCGGGAGCCGCGCAAGAAAACGCGAATATGGCTGGGGTCGTTTCCGGTGCCGGAGATGGCAGCGAAGGCATATGACGTGGCGGCGTACTGCCTGAAAGGCAGGAAGGCGCAGCTCAATTTCCCCGACGAGGTCGAACACTTGCCGCGGCCTTCCACATGTGCCAGAGATATCCAGGAGGCCGCGGCTAAGGCGGCTCATGCAATGAAAGCCTCCGCGAAGAAGAATAGCATTATGTCCGACGGATACGGCGACGGCGACAGCGGCGGGGATGATTTTTGGGGCGAGATTGAATTGCCAGAGCTGATGAACAGCGAGTGTTCCTGGAGTTCTCCGAGTGGTTCATCGTGGGCTCCTTCCGGCGACATCACCGCGTGGCCGGAGATGGAGCTTCCGGCGCAGCAGCAACCATTCATGGCGTGCTTATAA 597 0.5946 MEPTPPPCNREDDLTAAVSSAAIEPVDKSDNSRVGGTRHPVYRGVRKRRWGKWVSEIREPRKKTRIWLGSFPVPEMAAKAYDVAAYCLKGRKAQLNFPDEVEHLPRPSTCARDIQEAAAKAAHAMKASAKKNSIMSDGYGDGDSGGDDFWGEIELPELMNSECSWSSPSGSSWAPSGDITAWPEMELPAQQQPFMACL 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1324 198 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 28 162 - -
Lele39g1324 198 MobiDBLite consensus disorder prediction 20 39 - -
Lele39g1324 198 SUPERFAMILY DNA-binding domain 41 100 IPR016177 GO:0003677
Lele39g1324 198 CDD AP2 42 99 IPR001471 GO:0003700|GO:0006355
Lele39g1324 198 Pfam AP2 domain 40 90 IPR001471 GO:0003700|GO:0006355
Lele39g1324 198 PRINTS Ethylene responsive element binding protein signature 42 53 IPR001471 GO:0003700|GO:0006355
Lele39g1324 198 PRINTS Ethylene responsive element binding protein signature 80 100 IPR001471 GO:0003700|GO:0006355
Lele39g1324 198 Gene3D AP2/ERF domain 41 99 IPR036955 GO:0003700|GO:0006355
Lele39g1324 198 SMART rav1_2 41 104 IPR001471 GO:0003700|GO:0006355
Lele39g1324 198 ProSiteProfiles AP2/ERF domain profile. 41 98 IPR001471 GO:0003700|GO:0006355
Lele39g1324 198 FunFam Ethylene-responsive transcription factor 2 40 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1324 Lele-ChrLele39 21653852 21654448 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g1324 4 198 AP2-EREBP Transcription Factor Family AT1G01250 57.921 1.03e-58 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele39g1324 AP2 1.4e-13 CL0081