Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1318 ATGGAAGCGAAACCCCACCAACCATGCGCAGCTTGCAGGATGCTTCGCCGGAGATGTGACCGCAACTGCCTCCTCGCTCCGTACTTTCCTGCCGACGAGCTTGACAAGTTCGCCGTAGTTCACAGAGTCTTCGGCGCCAGCAACGTCATCAAAATGATTCAGATGGTGGAGGAGACGAAGAGGGAGGACGCAGTGAAAGCTATAGTGTACGAGGCAATGGCGAGGGTGAGGGATTCAGTGTATGGCAGTGCAGGGGCTATACAGCAGCTGCAGAAGATGGTTCAACAGCTCAAGGTGGAGGTGGAAGCCATGAAAGCTAGGGTTTCAGAGGTGCAACAACAAAGAGACGAGTTGCTGATGAATATTAATCCTGGTGTCCCTCAGTTTCCCGTCAATAATAATGTGCAAGACCCTTTCTTTGAAGACTATTACGCTGCTTTTTTGTCAGACCCAATAATGGATCAGTTTCCTCTGCGAGGCGACTTTGTGTTGTAG 495 0.5071 MEAKPHQPCAACRMLRRRCDRNCLLAPYFPADELDKFAVVHRVFGASNVIKMIQMVEETKREDAVKAIVYEAMARVRDSVYGSAGAIQQLQKMVQQLKVEVEAMKARVSEVQQQRDELLMNINPGVPQFPVNNNVQDPFFEDYYAAFLSDPIMDQFPLRGDFVL 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1318 164 SUPERFAMILY Spectrin repeat 64 119 - -
Lele39g1318 164 Coils Coil 87 121 - -
Lele39g1318 164 ProSiteProfiles LOB domain profile. 7 108 IPR004883 -
Lele39g1318 164 Pfam Lateral organ boundaries (LOB) domain 8 105 IPR004883 -
Lele39g1318 164 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 7 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1318 Lele-ChrLele39 21614999 21615597 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g1318 8 119 AS2 family AT1G07900 52.679 8.65e-39 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele39g1318 LOB 3e-37 No_clan