Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1297 ATGAATGCCGCGAAATCTAGGACCCGCGTGGGAAAATACGAACTGGGCAAAACCATTGGCGAGGGTAGCTTTGCCAAGGTGAAGTTTGCGAGAAACGTCGAGACAGGGCATCACTTCGCCATCAAAATCCTCGACCGTAACCATGTGCTTCGACACAAGATGGTGGAACAGCTGAAGAGAGAAATTTCCACAATGAAGCTGATCAAACATCCGAATGTTGTTAATATATTTGAGGTGATGGCAAGCAAAACAAAGATTTACATTGTACTTGAGTTTGTTGGTGGGGGAGAACTATTTGACAAAATAGCTAATGATGGGAGACTTAAGGAGAATGAAGCAAGGCAATATTTCCAACAGCTTATTAATGCTGTTGATTACTGTCATAGCAGAGGCGTGTTTCACAGAGACTTGAAGCCTGAGAATCTTCTTCTGGACTCCAATGGTATTCTGAAAGTTTCAGATTTTGGACTGAGTACATACTCACAGCAAGATGATGCATTGCTACGCACTGCCTGTGGAACCCCTAATTATGTTGCTCCTGAGGTGCTTACTGCTAAAGGCTATGATGGTTCGGCAGCTGATGTTTGGTCATGTGGTGTCATTCTCTTTGTTCTGATGGCTGGATACTTACCTTTTGATGAGCCAAATCAAATGGCTTTGTATAAGAAAATTAGCAAGGCTGAATTCTCATACCCATCGTGGTTTCCACCAGATGCAAAGAAACTGCTGAGTCGTATTCTTGATCCAAACCCTCTCACTAGGATAAAAATTCAGGAACTCTTGGAAGATAAATGGTTCAAGGAAGGATACAAACCACCATGTTTTGAAGAGGAAGAAGGTATAAATGTAGATGATGTAGCTGCGGCCTTCAATGATTCTAAGGAAAACCTTGTGACAGAAAGGAAAGAAAAACCCGTCTCCATGAATGCTTTTGAGCTCATTTCGAGGTCACAGAGTTTCAATCTTGACAGTTTGTTTGAGAAAGAGATGGGTATTGTGAAGCGAGAAACACGATTTACTTCTCAGCGCCCTGCACATGAAATTATGTCTAAAATTGAGGAAGCTGCCAAACCACTAGGATTTAATGTTCACAGGCGAAACTACAAGATGAAGCTTCAGGGTGACAAGAGTGGAAGGAAGGGACACCTCTCTGTGGCCACTGAGGTTTTTGAAGTGGCTCCCTCACTGCACATGGTGGAGTTGCGGAAGACAGGGGGTGACACACTGGAGTTTCACAAGTTCTACAAAAACTTCTCGTCAGGTTTGCAAGATGTAGTATGGCATTCTGAAGGGAGAAAATGA 1302 0.4309 MNAAKSRTRVGKYELGKTIGEGSFAKVKFARNVETGHHFAIKILDRNHVLRHKMVEQLKREISTMKLIKHPNVVNIFEVMASKTKIYIVLEFVGGGELFDKIANDGRLKENEARQYFQQLINAVDYCHSRGVFHRDLKPENLLLDSNGILKVSDFGLSTYSQQDDALLRTACGTPNYVAPEVLTAKGYDGSAADVWSCGVILFVLMAGYLPFDEPNQMALYKKISKAEFSYPSWFPPDAKKLLSRILDPNPLTRIKIQELLEDKWFKEGYKPPCFEEEEGINVDDVAAAFNDSKENLVTERKEKPVSMNAFELISRSQSFNLDSLFEKEMGIVKRETRFTSQRPAHEIMSKIEEAAKPLGFNVHRRNYKMKLQGDKSGRKGHLSVATEVFEVAPSLHMVELRKTGGDTLEFHKFYKNFSSGLQDVVWHSEGRK 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1297 433 FunFam Non-specific serine/threonine protein kinase 302 428 - -
Lele39g1297 433 FunFam Non-specific serine/threonine protein kinase 4 92 - -
Lele39g1297 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Lele39g1297 433 SUPERFAMILY Protein kinase-like (PK-like) 10 280 IPR011009 -
Lele39g1297 433 ProSiteProfiles NAF domain profile. 303 327 IPR018451 GO:0007165
Lele39g1297 433 Gene3D Transferase(Phosphotransferase) domain 1 93 291 - -
Lele39g1297 433 Pfam NAF domain 305 364 IPR004041 GO:0007165
Lele39g1297 433 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 9 413 - -
Lele39g1297 433 Gene3D Phosphorylase Kinase; domain 1 2 92 - -
Lele39g1297 433 CDD CIPK_C 309 422 - -
Lele39g1297 433 Pfam Protein kinase domain 13 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g1297 433 ProSiteProfiles Protein kinase domain profile. 13 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g1297 433 SMART serkin_6 13 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g1297 433 FunFam Non-specific serine/threonine protein kinase 6 306 - -
Lele39g1297 433 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Lele39g1297 433 Gene3D Kinase associated domain 1, KA1 302 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1297 Lele-ChrLele39 21402346 21407315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g1297 6 431 CBL-interacting serine-threonine protein kinases AT1G01140 76.674 0.0 694
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele39g1297 Pkinase 3.1e-72 CL0016