Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1291 ATGTTGTTAATGTCGCAACAACAAGGGCAATTCCAGATGGTGGGAGGGCAATACAACGACACAACATTGACAAAAATCTTCGTGGGAGGGCTTGCTTGGGAGACTCAAAGGGACACAATGAGAAGATATTTTGAGCAGTTCGGAGAGATCCTTGAAGCTGTTGTTATCACAGACAAGAACACAGGAAGATCCAAGGGTTATGGCTTTGTAAGCCCATGCATTATTTTGCTTGTTTTGTCTTTTGTCACATTTAAGGATCCAGAAGCAGCCATGCGAGCATGTCAGAACCTTTCTCCAGTTATTGATGGAAGAAGAACAAACTGCAATCTTGCTTCTCTTGGTGCAAACAAGAATCGTTCTCCAACTCCTCAACTTGGTACGGGAAGGTTCAGGGCAGCAGCTGGAATGGTGGGCTTGCCAGCAGCATATCGTGGCTCTTCTTCGTCCACAATTTTCCGTCAACCACCCACAGGGCAATACACATTTCCATATTCACCTTACGGATTCTCTGGATATTTTCAAGACTCCATATATCCCTTGAGCTATTACAATGTGTATGGAGGTCAACAATTTTCACCATATTATTCAACCAGTAACATTTACCCATTTTATACTCAATATTCACAGAGTGGGCAGGCTCATCATGGTTTTGGAATTCATCAGTATCATCATCCTCAAATGCTACAACACTTCCCAGTCCTTCATCAACACCACTATGGCACTGTCTCTCCTCCACTCCTGTCATTTCCTTCTTCAATGCCAATGCCAACTACTAGCGAAGTGGCAGCAGAGGGGCAGACAGCAGCATCAGTAGAGCCAGGTGGTGCTTCACAAGTCTCTGCAGTAAAAGCTTCGGAACAAAACTCTTCAACTTGA 876 0.4429 MLLMSQQQGQFQMVGGQYNDTTLTKIFVGGLAWETQRDTMRRYFEQFGEILEAVVITDKNTGRSKGYGFVSPCIILLVLSFVTFKDPEAAMRACQNLSPVIDGRRTNCNLASLGANKNRSPTPQLGTGRFRAAAGMVGLPAAYRGSSSSTIFRQPPTGQYTFPYSPYGFSGYFQDSIYPLSYYNVYGGQQFSPYYSTSNIYPFYTQYSQSGQAHHGFGIHQYHHPQMLQHFPVLHQHHYGTVSPPLLSFPSSMPMPTTSEVAAEGQTAASVEPGGASQVSAVKASEQNSST 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1291 291 PANTHER BOULE-RELATED 81 258 IPR037366 -
Lele39g1291 291 CDD RRM_RBM24_RBM38_like 24 111 - -
Lele39g1291 291 SUPERFAMILY RNA-binding domain, RBD 23 123 IPR035979 GO:0003676
Lele39g1291 291 MobiDBLite consensus disorder prediction 257 291 - -
Lele39g1291 291 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 26 70 IPR000504 GO:0003723
Lele39g1291 291 Gene3D - 3 128 IPR012677 -
Lele39g1291 291 SMART rrm1_1 25 109 IPR000504 GO:0003723
Lele39g1291 291 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 24 71 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1291 Lele-ChrLele39 21330712 21332167 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g1291 20 112 C2H2 Transcription Factor Family AT2G19380 37.634 7.53e-12 63.5