Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1281 ATGTTTGAACCCAAGATTGTTGCAAGAACAAGCTCCAAGTCAACCGATAAGCGGTACTGGCAATTGGGTCTTCTTGGTGTGCTGTTGCAAACTTGTAATTTTGTATTGTTTGCTGTGTCGATTATGCCTGTTTCTTCATTCTTCGTGAACCCTGAGAAGTCAAAGTGTTATTCTTTTTTATCATCTTCCAAAGAGCCGAATGGTAACCACTGCGCGTCCCTCCCTCCTTCAAAGCATGCTGATCTGGACATGCAGCCCAGTATGTGTTCTGTATGTGCTGCTACTGTTATATTTAGTGTCTGTGGTAGGAAGGTTGATCATGTAACTTATTCCTTCAAATGTCAAGCCTATGGAATGTTTCTGATGGAACCACAAGGCTCTCAACGTGCCCAAATTATTGAAGTCAGTGGCGATTCTCCTGAAGGAAGGAGAAATCCTGGAGGAACCAAGATTTGTGGGGAAGCACCATGTGGATTTGCAGATGCTGGGGCCATCTCTAAGGATTCTAAAGAACGATTAACATCGATGCGAAAGCTTTGGACTGCCGTGATCCTCTGTGTAGTTTTCATGAGCGTTGAAGTAGTTGGTGGCATTAAAGCCAATAGTCTAGCAATTCTGACTGATGCAGCCCATTTACTTTCAGATGTTGCGGCCTTTGCCATCTCCTTGTTCTCTCTATGGGCTGCTGGATGGGAAGCCACACCCCGTCAGTCATATGGATTTTTTAGAATAGAGATTCTTGGGGCCTTGGTTTCTATTCAACTAATATGGCTGCTTGCAGGGATTCTGGTATACGAAGCCATTGTAAGAATCATTGATGGTTCTCACGAGGTGAATGGCTTCTTAATGTTTTTGGTTGCTGCATTTGGTCTAGTGGTTAACATCATCATGGCTTTGTTATTGGGCCATGATCATGGCCATGGACATGATGATTATCATCATGGTTTAGGCCATGGACACAACCATGGTCATGGGTTTACAGGGTCGACCCACCATGATCATGGCCATCATCATCATCATCACAGTGGTGAGGATGACAAGCGCCACCATCATGATGAAGAAGATCCGCAAAATGAGCATCATCACGCTCATGACAGTGCTGCTGAGCCTCTTCTTGGTGGATCAAAAGACAAACCGGAAAAGAAGAGGCGAAGGAACATAAATGTACAAGGGGCATATCTCCATGTTCTAGGGGACTCAATCCAAAGCGTTGGAGTAATGATTGGGGGAGGTATCATTTGGTACAAGCCCGAGTGGCAAATAGTTGATCTAATCTTCACTCTTATTTTTTCAGTAATTGTTTTGTTAACAACTATCACTATGCTGCGAAACATACTTGAAGTTCTGATGGAGAGCACACCGCGTGAGATTGATGCGACTAAGTTGGAAAGGGGTCTGTTAGACATGGATGAAGTAGTGGCTGTTCATGAGCTGCATATATGGGCAATTACAGTGGGGAAGATTTTGTTGGCTTGTCATGTCAAAATCAGCCGTGAAGCAGATGCAGAAATGGTGCTGGACAAGGTTGCAGACTATATAAGAAGGGTTTATAACATCAGCCATGTTACCATTCAGATAGAGCGTTAG 1587 0.4398 MFEPKIVARTSSKSTDKRYWQLGLLGVLLQTCNFVLFAVSIMPVSSFFVNPEKSKCYSFLSSSKEPNGNHCASLPPSKHADLDMQPSMCSVCAATVIFSVCGRKVDHVTYSFKCQAYGMFLMEPQGSQRAQIIEVSGDSPEGRRNPGGTKICGEAPCGFADAGAISKDSKERLTSMRKLWTAVILCVVFMSVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEATPRQSYGFFRIEILGALVSIQLIWLLAGILVYEAIVRIIDGSHEVNGFLMFLVAAFGLVVNIIMALLLGHDHGHGHDDYHHGLGHGHNHGHGFTGSTHHDHGHHHHHHSGEDDKRHHHDEEDPQNEHHHAHDSAAEPLLGGSKDKPEKKRRRNINVQGAYLHVLGDSIQSVGVMIGGGIIWYKPEWQIVDLIFTLIFSVIVLLTTITMLRNILEVLMESTPREIDATKLERGLLDMDEVVAVHELHIWAITVGKILLACHVKISREADAEMVLDKVADYIRRVYNISHVTIQIER 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1281 528 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 127 528 - -
Lele39g1281 528 MobiDBLite consensus disorder prediction 345 367 - -
Lele39g1281 528 Pfam Cation efflux family 179 450 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Lele39g1281 528 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 456 527 IPR036837 -
Lele39g1281 528 Gene3D Cation efflux protein transmembrane domain 175 449 IPR027469 -
Lele39g1281 528 SUPERFAMILY Cation efflux protein transmembrane domain-like 176 451 IPR027469 -
Lele39g1281 528 MobiDBLite consensus disorder prediction 312 383 - -
Lele39g1281 528 TIGRFAM CDF: cation diffusion facilitator family transporter 176 528 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1281 Lele-ChrLele39 21291823 21295425 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g1281 122 528 Inorganic Solute Cotransporters AT2G46800 71.149 9.68e-178 504