Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele39g1276 | ATGCATTTGAGTATCAGGACAAGATCCAAGGTTCAATATAATGAAGTATTTAACAAAGCGATGGTGAATCATACGTCTTTAGCAGTGTCCAAGATTCTGGAATCCTACAAAGGTTTTGAGGACATGACAAGACTGGTGGATTGGATACTGCATGATTGGAGTGATGAGTTGTGCTTGAAGCTGTTGAAGAACTGCTATGAAGCAATTCCAGAAGATGGGAAGGAGATAGTGGTGCAAGCATCATTTCCGATTGTGCCAGAAACCTCAGCAGCTACGCAGAGCATCTCCCAACTTGATATGCATATGCTGACTCAGAACCCAGGCGGCAAGAAGCGAAGCGCGCAAGAGTTCATGGAATTAGCCCCGTCAGCTGGGTTTAGTGGGTATTAG | 390 | 0.4487 | MHLSIRTRSKVQYNEVFNKAMVNHTSLAVSKILESYKGFEDMTRLVDWILHDWSDELCLKLLKNCYEAIPEDGKEIVVQASFPIVPETSAATQSISQLDMHMLTQNPGGKKRSAQEFMELAPSAGFSGY | 129 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele39g1276 | 129 | Pfam | O-methyltransferase domain | 46 | 127 | IPR001077 | GO:0008171 | |
| Lele39g1276 | 129 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 46 | 127 | IPR029063 | - | |
| Lele39g1276 | 129 | Gene3D | Vaccinia Virus protein VP39 | 48 | 128 | IPR029063 | - | |
| Lele39g1276 | 129 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 1 | 129 | IPR016461 | GO:0008168 | |
| Lele39g1276 | 129 | PANTHER | O-METHYLTRANSFERASE | 48 | 126 | IPR016461 | GO:0008168 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele39g1276 | Lele-ChrLele39 | 21265895 | 21266766 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele39g1276 | 12 | 47 | Monolignol Biosynthesis Gene Families | AT5G54160 | 55.556 | 4.99e-09 | 51.2 |