Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1275 ATGGCATCCAATGAAGACCACCAAAAGCAAAGTGAAGCAGTAGCAATGCACCAAAACGTTGTCGTCGCCAAGAACCTCTTGAAGAGGGATGCTCTTTACCAGGAGAAGAATCATGGAAGCTCCGATTTCATATTTGGGGATGCTCACAAGGACAATTATCTTAACTATCACGAGAGGCTGATGGAGCTGGTGAAGATTGGGTGTGTGATCGGCTACGACAACACATTATGGTACGGGTCTATCGTGCGCATAAGCTCACGTATGAGTCCATCATGTCGTATACAGAGTTTGTGTTGGAGCTCAACAAGGCTCTTGCTGTGGACTCTAGACTTGAAATTTGCAGGCTTCCTGTTGGTGACGGACTCACTCTGTGCCGTCAGATCTAATGACCAATCCACCTGCCGCCACTCAGATTTCATCCTCCTCAACACACCATGCAAAGACTTTCTGCAACAAGCACCAGAAACAGACGACCAAGAAGAAGAGAGCTTCTCCTACGCGATACAGCTAACCACAACTATTACCATTTCAATGGCAATGCAAACAGCGGTGGAGCTCGGCGTCTTCCACGTCATTCACAGAGCCGGCCCCAACGCTCGGTTCTCCGCCATCGAGATCGCATCTGAGCTCTCTACAAAGAACACTGAAGCGACTTCCTTGCTTGATCGTCTCCTCCGGCTTCTGGCGCGGATAATTCTGTGCTTCACTGTTCCGTTATTCTTGAATCCTACAAAGGTTTTGGGGATATCACTACTCACTAGACTTGTGGATGATGGAGGTGGTATTGGAATTACTCTCAACTTGATCACTTCCAAAAATGGAAAAGTGATTGTGGTGGACGCAATTTTGCCCATTGCAACTGATATTTCTGCTACTTATACGAAGAGCACCTCGCAATTTGATGTGATGATGGCTCATTGCGGTGGCAAAGAGAGAAGCTAA 942 0.4724 MASNEDHQKQSEAVAMHQNVVVAKNLLKRDALYQEKNHGSSDFIFGDAHKDNYLNYHERLMELVKIGCVIGYDNTLWYGSIVRISSRMSPSCRIQSLCWSSTRLLLWTLDLKFAGFLLVTDSLCAVRSNDQSTCRHSDFILLNTPCKDFLQQAPETDDQEEESFSYAIQLTTTITISMAMQTAVELGVFHVIHRAGPNARFSAIEIASELSTKNTEATSLLDRLLRLLARIILCFTVPLFLNPTKVLGISLLTRLVDDGGGIGITLNLITSKNGKVIVVDAILPIATDISATYTKSTSQFDVMMAHCGGKERS 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1275 313 SUPERFAMILY "Winged helix" DNA-binding domain 158 230 IPR036390 -
Lele39g1275 313 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 122 IPR002935 GO:0008171
Lele39g1275 313 Gene3D - 147 236 IPR036388 -
Lele39g1275 313 Pfam Dimerisation domain 178 229 IPR012967 GO:0046983
Lele39g1275 313 FunFam Caffeic acid 3-O-methyltransferase 148 248 - -
Lele39g1275 313 Pfam O-methyltransferase 14 96 IPR002935 GO:0008171
Lele39g1275 313 Gene3D Vaccinia Virus protein VP39 8 111 IPR029063 -
Lele39g1275 313 Gene3D Vaccinia Virus protein VP39 272 313 IPR029063 -
Lele39g1275 313 PANTHER O-METHYLTRANSFERASE-RELATED 26 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1275 Lele-ChrLele39 21257899 21264350 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g1275 35 82 Monolignol Biosynthesis Gene Families AT4G34050 77.083 4.64e-20 86.7