Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1273 ATGAACGCATACTCCTCTGGAGGAGAAGTTATTGTTAAGACAAGAAAACCATATACAATCACAAAGCAAAGAGAAAGATGGACTGAGGAGGAGCATAATAGGTTTCTAGAAGCCTTAAAGCTCTATGGGAGAGCATGGCAGCGCATTGAAGAGCATATAGGAACGAAGACTGCTGTGCAAATCAGGAGCCATGCACAGAAATTCTTTTCAAAGCTGGAGAAAGAGGCTCTTGAGAAGGGTGTTCCGATAGGACAAGCTCTTGACATAGACATCCCTCCTCCACGGCCCAAAAGAAAACCAACTAATCCTTATCCTCGGAAGACCAGTGCTGGCTCTCCAGCATCACATAATGGAGGAAAAGATGGAAAACTAACTTCTGTTTCACCTTCTCATACACTGGACTTAGAGAAAGAACCGCCTCCGGAGAAATCTAATGGAGACGAAAGACCAATAAATGTTACTGAAAATAAGGATGAGAACTGCTCAAGAGTATTTGCTATTCCACAGGAGGCACCCTGTTCCGCTATATCTTCGGCAAAGAACAGATCAATTTCACCGTCAGTGCCTCTGAGAAACTCATGCATTCTAAGGGACTTCCTACCTTCAGTAAGAGTGGGAAGTACTCGAGATGAAACAAATGAATCTTCGGTCACTATTGAACTTGAAAACCAGAAGTGCAAGATGGATAAAGGAAAACTAGAACAGACAAAAGCCTCTAAATTGGAGGGTTCTGATGCTTCAGGTGTAAAATTGGTTCAAAGTCAGAAAAAAGATGATCTCAATTGTGCATTGACTACAGAAGGGATACAAGACAATCAGAACCCTCCCCAAGATATGCTATTACGAGACTCAATATTTCAGCCTGTGGGAGAGGTTATTGGGCAACCTAATATTTTCACAGATTCAGCTGCATCAAACACGAGCGAAAGTAAGAATAACACACCTCGACCTTCTATTCATCAATTATTTCCTGCTTATCCTCCCATCCCGCAAGTTCTCTGTAGTCAAGATCATTGCCATTCATTTTTTCAAATGTCCTCCACATTTTCAAGCCTCATTGTCTCCACCCTAATGCAAAATCCTGCAGCCCATGCTGCAGCTAGTTTTGCTGCTACATTTTGGCCCTATGCAAATGCAGAAGCTTCAGCCGATTCTGCTGCTTCCTCTCAAGGAGGTCTCACATCAAGACAAATTGGCTCTCCTCCAAGTATGGCAGCTATTGCAGCTGCTACTGTCGCTGCTGCAACTGCATGGTGGACCGCCCATGGACTGCTTCCTTTGTGTGCTCCACTCCATTCTGCCTTCTCCTCTCCTCCTGCATCCGTGGTGGTAGTTCCTTCCATTAATACCTGCGAAGCAGAAACAGATAAGAAAGATCAGAAAGAGATTAGGGTTGAGAATCCTCTGCAAGATCAGATGCCAAATGGAGAATATTCAGAAGCTCTGCAAGCTCAACATTCAGACTCCAAGTCGCAAGCTGTTTCCTCATCAGATTCTAAGAGTGGAGATGCCAAGTTAACTGCTTCACCTAAGGCTGCAGAACATGACAAGAACGAAGCAATCTCCGAGCAACTTGATTCCAACAAGACCAACGGAAGAAAACTGGTTAACCGTTCTTCATGTGGCTCCAATACAACCTCTAGTAGTGATATAGAGACAGATGCATTAGAGAAGAATGAGAAAGGGAAGGAAGAGTCCTTAACACCAGATGCAAACCAATTAACAACTGAGCCTAGTAATCGCCGTAGTAGGAGTGCTGGCATCCTTCCTGATTCTTGGAAAGAGGTCTCTGAAGAGGGGCGACAGGCCTTTCAGGCTCTCTTCTCCAGAGAGGTTTTGCCGCAAAGCTTTTCGCCACCATACTTGGAAAAGGACATTCAGAAAGACCACAAAAATGAGGATCACAAGCAGAACATAGTTGACAAAGATGAAGACCTTGACAGCAACAAATACAGCTCTGATCAGGTAGGGGTAGAGAAGAACATGCCATTTGTAGAAAACACACGAGAAGAGGAGGGACTTCTAACCATAGGGCTTGGACAAGGAAAGCTTAAGGCATGTCGAACCGGGTTTAAACCTTACAAAAGATGTTCAGTGGAGGCCAAGGAACATAGGGTTGGAACTACGAGTAACCGCCAGGGTGAAGAGAAAGGTCCGAAGAGAATACGCTTGGATGGGGAGGCTTCAACTTGA 2193 0.4455 MNAYSSGGEVIVKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALEKGVPIGQALDIDIPPPRPKRKPTNPYPRKTSAGSPASHNGGKDGKLTSVSPSHTLDLEKEPPPEKSNGDERPINVTENKDENCSRVFAIPQEAPCSAISSAKNRSISPSVPLRNSCILRDFLPSVRVGSTRDETNESSVTIELENQKCKMDKGKLEQTKASKLEGSDASGVKLVQSQKKDDLNCALTTEGIQDNQNPPQDMLLRDSIFQPVGEVIGQPNIFTDSAASNTSESKNNTPRPSIHQLFPAYPPIPQVLCSQDHCHSFFQMSSTFSSLIVSTLMQNPAAHAAASFAATFWPYANAEASADSAASSQGGLTSRQIGSPPSMAAIAAATVAAATAWWTAHGLLPLCAPLHSAFSSPPASVVVVPSINTCEAETDKKDQKEIRVENPLQDQMPNGEYSEALQAQHSDSKSQAVSSSDSKSGDAKLTASPKAAEHDKNEAISEQLDSNKTNGRKLVNRSSCGSNTTSSSDIETDALEKNEKGKEESLTPDANQLTTEPSNRRSRSAGILPDSWKEVSEEGRQAFQALFSREVLPQSFSPPYLEKDIQKDHKNEDHKQNIVDKDEDLDSNKYSSDQVGVEKNMPFVENTREEEGLLTIGLGQGKLKACRTGFKPYKRCSVEAKEHRVGTTSNRQGEEKGPKRIRLDGEAST 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1273 730 SMART sant 23 71 IPR001005 -
Lele39g1273 730 MobiDBLite consensus disorder prediction 84 157 - -
Lele39g1273 730 Pfam Myb-like DNA-binding domain 24 67 IPR001005 -
Lele39g1273 730 MobiDBLite consensus disorder prediction 623 650 - -
Lele39g1273 730 MobiDBLite consensus disorder prediction 700 730 - -
Lele39g1273 730 MobiDBLite consensus disorder prediction 300 319 - -
Lele39g1273 730 CDD SANT 26 69 IPR001005 -
Lele39g1273 730 MobiDBLite consensus disorder prediction 135 156 - -
Lele39g1273 730 MobiDBLite consensus disorder prediction 452 466 - -
Lele39g1273 730 MobiDBLite consensus disorder prediction 524 552 - -
Lele39g1273 730 MobiDBLite consensus disorder prediction 553 567 - -
Lele39g1273 730 PANTHER SWI/SNF COMPLEX-RELATED 9 485 - -
Lele39g1273 730 MobiDBLite consensus disorder prediction 472 504 - -
Lele39g1273 730 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 22 71 IPR006447 GO:0003677
Lele39g1273 730 SUPERFAMILY Homeodomain-like 18 74 IPR009057 -
Lele39g1273 730 ProSiteProfiles Myb-like domain profile. 19 69 IPR001005 -
Lele39g1273 730 MobiDBLite consensus disorder prediction 105 132 - -
Lele39g1273 730 MobiDBLite consensus disorder prediction 509 523 - -
Lele39g1273 730 MobiDBLite consensus disorder prediction 568 586 - -
Lele39g1273 730 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 73 IPR017930 -
Lele39g1273 730 ProSiteProfiles SANT domain profile. 22 73 IPR017884 -
Lele39g1273 730 MobiDBLite consensus disorder prediction 615 665 - -
Lele39g1273 730 Gene3D - 26 73 - -
Lele39g1273 730 FunFam protein REVEILLE 6 isoform X1 26 74 - -
Lele39g1273 730 MobiDBLite consensus disorder prediction 452 596 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1273 Lele-ChrLele39 21233872 21240836 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele39g1273 Myb_DNA-binding 2.6e-13 CL0123