Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1271 ATGGATGTCGGGGGGCCCAACCAGGCGCACCTGATCGGAGATTACATACTGGGACCGCAAATCGGGTCGGGTTCGTTCGCGGTGGTGTGGCACTCAAGGCATCGTCACTCGGGTTTGGAGGTTGCGGTTAAGGAGATTGACAAGAAACAGCTCAGCCCAAAAGTCAGTGACAATCTGCTTAAAGAGATTTCTATTCTTAGCACCACCAATCACCCAAACATTATACGATTGTTCGAAGTAATCCAGACCAATGATAGGATTTACCTTATTTTGGAGTATTGTAATGGTGGTGACCTTGCTACTTACACTCATCGACGCGGAAAAGTTTCAGAATCCATTGCGCGGCATTTTATGAGACACTTGGCTGCGGGGTTGATGGTACTCCAAGAAAAGCACCTCATTCATAGAGATCTAAAACCACAGAACTTACTGTTGTCTGGTGCTGGAGACACGCTTTGTGGCTCACCATTGTACATGGCTCCAGAGATAATTCAAAATCAGAAGTATGATGCCAAGGCTGATTTATGGAGCGTTGGAGCCATATTGTTCCAGCTAGTGACTGGGAGGCCACCATTTGTTGGAAATAGTCAATTGCAGCTTTTTCAGAACATTTTAACATCCACTGAGCTGCGGTTCCCAAAAGCGGCTTTAAATGAGCTACATTCAGACTGTTTGGATCTTTGCAGAAGCCTCTTACGTCTAAACCCAGGTACTGATTGCAGCTGCATGGCAAGCACATATGTGCAATGTCCTGTTGAGCGATTGACATTCAAAGAGTTCTTTGATCACAATTTCCTAAAGGAGCCCAGGTCAATTGTGAATGTTGAACGGTCTTCTATACAACCACCAGAAAGATCAACGGTCCGGCAATATGGTAGCATCTCAACATCTGACAAAAGGCCTCATTTGCATTCTGGCCATCATCTTGAGACATCAGCAGATGACCAAGTTGTAATCAGTTCTTCTGTCAATGAGACCGTGCTGTTACAAAGAAAGCATAGTGGGAATGCTGCTGACACCAAGAGTGTTAAGGGCAGAACTTCAACTACTCGTGACAAGCAGGGACTTGGTACTCTTGCACCATTGTCAGACCAGCTTCATGCTTCTCATTTGATGGAGTCCATTGAGAAAGACTATGTCCTAGTCAATCCTCACTTTGCATCATTGGAGGCTTTGTCTGATTACTTTGAGGCGTCTGTGCAAGGTAATATCACAAGCATGGTTTCTATCTGTCCTTCAACGAGGGTTGACCTTGAAGTTGGAGTTGTAAAGAAAACGAAGGATTTAGCCTCTTGCTATGTTGATGGAGAAGAAAGCACAAAAAGTGATAAATTCGAGGCATCCTCTGTCTTTGCCGTCCTGAGGAAAGAGCAGGTTGCATCATCAAAGCAGCCTTCGGGATTGTATCTAGAATCATTTGCAGTCGAACTGGTGGTTTTGGCTATATGGAAAAAAGCTTTTGAAATTTGTAATGGAAGCATTTCAGGAAAGGAATCCACAACCTCATGCGGAGATGATAGCATATCACAACCCATGCTAAAGAAAATAGATTTTAGTGATCCTTCCGCTGTGTCCTTGTGGGCCAAGAAAGGATTTATTTTTGCAGTTGATCATGCTGAGAAGCTTTCATGCCTTATTCAGAATTTGGATGGTAGGACTGCCTTTCTTGTTCTGACTTTACTTCTTTTGGTGGAAAATTTGTCTGCACTATGTACTAAGAATATGAAATATATTACAGGTACAGCTGAGATGCCAGATGCAATGGAGATCATATTTCAAAAAGCACTATCAATCGGCACAAGTGGTGCTGTAGACGAGTATATGGAAAATAGAGGTAAGGCAACTGTATCGTACTCAAAAGCGATGCTTTTACTATCATTCATTGTGAACGAAGCAGTTTACCTTCCTCTGAACCCGCCATTCTCACTAACTCCTGCTAATAAGAAGAGAATTTTAGAGTATATTTTCAACCTGCGGTTGCATCAACTTCAGTCTTCTTCATCAGAGCCTTCTAAGGCATCCGACATTCTTTCATGA 2037 0.432 MDVGGPNQAHLIGDYILGPQIGSGSFAVVWHSRHRHSGLEVAVKEIDKKQLSPKVSDNLLKEISILSTTNHPNIIRLFEVIQTNDRIYLILEYCNGGDLATYTHRRGKVSESIARHFMRHLAAGLMVLQEKHLIHRDLKPQNLLLSGAGDTLCGSPLYMAPEIIQNQKYDAKADLWSVGAILFQLVTGRPPFVGNSQLQLFQNILTSTELRFPKAALNELHSDCLDLCRSLLRLNPGTDCSCMASTYVQCPVERLTFKEFFDHNFLKEPRSIVNVERSSIQPPERSTVRQYGSISTSDKRPHLHSGHHLETSADDQVVISSSVNETVLLQRKHSGNAADTKSVKGRTSTTRDKQGLGTLAPLSDQLHASHLMESIEKDYVLVNPHFASLEALSDYFEASVQGNITSMVSICPSTRVDLEVGVVKKTKDLASCYVDGEESTKSDKFEASSVFAVLRKEQVASSKQPSGLYLESFAVELVVLAIWKKAFEICNGSISGKESTTSCGDDSISQPMLKKIDFSDPSAVSLWAKKGFIFAVDHAEKLSCLIQNLDGRTAFLVLTLLLLVENLSALCTKNMKYITGTAEMPDAMEIIFQKALSIGTSGAVDEYMENRGKATVSYSKAMLLLSFIVNEAVYLPLNPPFSLTPANKKRILEYIFNLRLHQLQSSSSEPSKASDILS 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1271 678 MobiDBLite consensus disorder prediction 279 311 - -
Lele39g1271 678 Pfam Protein kinase domain 18 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g1271 678 FunFam Non-specific serine/threonine protein kinase 3 95 - -
Lele39g1271 678 Gene3D Transferase(Phosphotransferase) domain 1 150 336 - -
Lele39g1271 678 Gene3D Transferase(Phosphotransferase) domain 1 7 149 - -
Lele39g1271 678 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Lele39g1271 678 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 11 469 IPR045269 GO:0004674|GO:0006914
Lele39g1271 678 MobiDBLite consensus disorder prediction 334 356 - -
Lele39g1271 678 SUPERFAMILY Protein kinase-like (PK-like) 11 306 IPR011009 -
Lele39g1271 678 MobiDBLite consensus disorder prediction 279 299 - -
Lele39g1271 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Lele39g1271 678 MobiDBLite consensus disorder prediction 334 357 - -
Lele39g1271 678 ProSiteProfiles Protein kinase domain profile. 15 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g1271 678 SMART serkin_6 15 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1271 Lele-ChrLele39 21227455 21232917 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g1271 5 238 CBL-interacting serine-threonine protein kinases AT2G30360 35.521 7.03e-47 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Lele39g1271 Pkinase 3.8e-53 CL0016