Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1252 ATGTTGGAGGATGGAAGGCCGCTAGTGTTGTTCATCAGCATCTATATCCTGGGTTTAATCCCCATTGCCATCAATGGCGACACGGATCCAAGTGATGCTGCTGCTCTAAGGGTATTGTTTGGCAGTATGAATTCACCATCCCAGTTAGGTTGGCCTGCAAATGGTGATGATCCATGTGGACAGCACTGGAAGGGCATTAGTTGCTCGGGCAACCGAGTCACAGAGATCAAGTTACCTGGCCTTGGACTAACTGGAACGCTGGGCTACCAGTTACAAACCCTGACATCTGTGATCAACCTAGACATGAGTAATAATAATCTTGGAGGCACTATACCATATCAACTTCCTTCAAATGTGACGCGATTAAACCTTGCCAACAACAACTTCACCGGGGAAGTAGTTTATTCTATTTCTGATATGACTTCTCTTACATACCTAAATCTTGGTCACAATCAACTCCAGGGTGCACTGAGTGTCGACTTTGAAAAGCTTTCTTCACTCTCCACATTGGATCTCTCTTTCAATTCTCTATCTGGTGACCTTCCTCAGAGTTTGACCTCACTTTCAAGCATCACCACCATGTATTTGCAAAACAATCAGTTTACAGGCACCATTGATGTCCTTGCTGGTCTTCCTCTTGAATATCTGAATGTGCAAAACAATCATTTTACAGGTTGGATACCAGAACAGTTGAAAAACATAAACCTACAGAAGGATGGTAATGCATGGAGCTCAGGCCCTGCACCCCCACCCCCACCTGGGACACCTCCTGTGACTACTAGAAGCACCCAAACTCACAAAACTGGCGGTAGCAATGGAAGAAATGCCCCATCAAATGATGATACCAGTGACAATGATAAAAAATCCAGTATAGGAGGTGGTGCCATTGTGGGAATAGTGATCACCATCTTAATTGTCGGGGCAATAGTAGCATTCTTTCTGATGAAGAGGAGATCCAAGAAGCCATCTCCAGATATAGAAAATGTTGACAATCAGCCCTTTGCTCCTCTTGCATCAAATGAAGTGCATGAAATGAAGTCAGTGCAAACATCCTCTGTACCTGACACAAAGACTTTTGTTCCTTCTGTCTCATTCAATCTCAAACCTCCACCTATTGATCGTCACAAATCATTTGATGAAGATGAACCTTCAAAGAAGCCTGATATTGTAAAGAAAACTGTAACACCTCCTACAAATGTAAGATTATATTCTATAGCAGAACTACAGATTGCTACTGGCAGCTTCAGTTTAGATCACCTTCTTGGTGAGGGATCTTTTGGACGCGTTTACCGTGCTCAATTTGATGATGGAGAGGTTCTTGCCGTGAAGAAGATAGATTTATCTGTTGTTCCTAATGATATGTCTGAAGATTTTATTGAAGTCATTTCAAACATCTCCCACTTGCACCATCCCAATGTAACAGAGCTGATTGGTTATTGTTCAGAGCATGGTCAACATCTTCTGGTCTCTGAGTTTCATAAGAGTGGATCACTACATGACTTCCTTCACTTGCCAGACGAACATAGCAAACCATTGATATGGAATTCCCGTGTTAAGATTGCCTTGGGAACTGCACGTGCTTTAGAGTACCTGCATGAAGTCTGTTCACCATCAGTTGTTCATAAAAATATTAAATCAGCCAACATATTGCTCGATACAGAGCTTAATCCTCATCTTTCTGACAGTGGATTGGCAAGCTATATTCCAAATGCCGACCAGGTATTAAACCATAATGCTGGATCGGGATACGAGGCACCTGAAGTTGGCTTGTCTGGTCAGTATACTCTGAAGAGTGATGTCTTTAGCTTTGGAGTTGTCATGTTGGAGCTTCTTAGTGGACGGAAACCATTTGATAGCTCAAGGCCAAGGTCTGAGCAGTCTCTAGTTCGATGGGCAACTCCGCAGCTTCATGATATTGATGCATTGACTAAAATGGTGGATCCTGCACTGGAAGGTCTATTCCCTGTTAAGTCTCTTTCTCGGTTTGCCGATGTTATTGCTCTTTGCGTTCAGCCGGAGCCTGAATTCCGACCACCAATGTCAGAAGTGGTTCAAGCATTGGTCCGGTTGGTGCAACGCTCAAACTTGAGCCGGCGAACAACATTCGGATCATCTGACCAAGGAGGATCCCAGAGAGGAGATAACTCAGAAGCACAAGAAATGTAA 2166 0.4354 MLEDGRPLVLFISIYILGLIPIAINGDTDPSDAAALRVLFGSMNSPSQLGWPANGDDPCGQHWKGISCSGNRVTEIKLPGLGLTGTLGYQLQTLTSVINLDMSNNNLGGTIPYQLPSNVTRLNLANNNFTGEVVYSISDMTSLTYLNLGHNQLQGALSVDFEKLSSLSTLDLSFNSLSGDLPQSLTSLSSITTMYLQNNQFTGTIDVLAGLPLEYLNVQNNHFTGWIPEQLKNINLQKDGNAWSSGPAPPPPPGTPPVTTRSTQTHKTGGSNGRNAPSNDDTSDNDKKSSIGGGAIVGIVITILIVGAIVAFFLMKRRSKKPSPDIENVDNQPFAPLASNEVHEMKSVQTSSVPDTKTFVPSVSFNLKPPPIDRHKSFDEDEPSKKPDIVKKTVTPPTNVRLYSIAELQIATGSFSLDHLLGEGSFGRVYRAQFDDGEVLAVKKIDLSVVPNDMSEDFIEVISNISHLHHPNVTELIGYCSEHGQHLLVSEFHKSGSLHDFLHLPDEHSKPLIWNSRVKIALGTARALEYLHEVCSPSVVHKNIKSANILLDTELNPHLSDSGLASYIPNADQVLNHNAGSGYEAPEVGLSGQYTLKSDVFSFGVVMLELLSGRKPFDSSRPRSEQSLVRWATPQLHDIDALTKMVDPALEGLFPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRSNLSRRTTFGSSDQGGSQRGDNSEAQEM 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1252 721 MobiDBLite consensus disorder prediction 259 279 - -
Lele39g1252 721 PANTHER LEUCINE RICH REPEAT KINASE 2 71 693 - -
Lele39g1252 721 Gene3D Ribonuclease Inhibitor 182 245 IPR032675 -
Lele39g1252 721 MobiDBLite consensus disorder prediction 372 389 - -
Lele39g1252 721 MobiDBLite consensus disorder prediction 699 721 - -
Lele39g1252 721 MobiDBLite consensus disorder prediction 321 340 - -
Lele39g1252 721 ProSitePatterns Protein kinases ATP-binding region signature. 421 444 IPR017441 GO:0005524
Lele39g1252 721 SUPERFAMILY L domain-like 28 233 - -
Lele39g1252 721 SUPERFAMILY Protein kinase-like (PK-like) 395 687 IPR011009 -
Lele39g1252 721 Pfam Protein tyrosine and serine/threonine kinase 417 687 IPR001245 GO:0004672|GO:0006468
Lele39g1252 721 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 29 254 - -
Lele39g1252 721 ProSiteProfiles Protein kinase domain profile. 415 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g1252 721 Gene3D Transferase(Phosphotransferase) domain 1 494 707 - -
Lele39g1252 721 MobiDBLite consensus disorder prediction 238 291 - -
Lele39g1252 721 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Lele39g1252 721 MobiDBLite consensus disorder prediction 370 392 - -
Lele39g1252 721 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 379 492 - -
Lele39g1252 721 Gene3D Ribonuclease Inhibitor 31 181 IPR032675 -
Lele39g1252 721 Gene3D Phosphorylase Kinase; domain 1 378 492 - -
Lele39g1252 721 Pfam Leucine rich repeat 117 177 IPR001611 GO:0005515
Lele39g1252 721 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 493 701 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1252 Lele-ChrLele39 21069805 21076063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g1252 2 700 Strubbelig Receptor Gene Family AT1G53730 66.054 0.0 875
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lele39g1252 PK_Tyr_Ser-Thr 3.2e-41 CL0016