Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1220 ATGGAATCTGAGGACAAGATCCAGTCGTCTCATTCACCGACCAGTGAATCTCCGGGTTCGCCGCGTGCCAACGGGCGGATCACGGTTACGGTGGCTGCTCCGGCGCCGTTTCCGCCCCAAAACAGCTTGGCACTAGCGCTTCCGGTCCAGAACCAGCAGCCGAAGGGTAATGGTGGTGGTGGAGGAGGGAGGGAGGATTGCTGGAGTGAAGGAGCTACGGCGGTGTTGATCGATGCGTGGGGGGAGAGGTACCTGGAACTGAGCCGGGGGAATCTGAAGCAGAAGCACTGGAAGGAGGTTGCGGATATCGTGAGCAGCAGGGAGGACTACAGGAAAACCCCTAAGAGTGATATTCAGTGCAAGAATCGGATCGACACTGTGAAGAAGAAGTACAAGTTGGAGAAGTCCAAGATCGCGGCCGGTGGTGGACCTAGTAAATGGCCGTTTTACGAGAGACTGGACCAGTTGATCGGTCCGACTGCGAAAATTTCTGGGTCTTCCGGCGGCGCTGCCGCTGGAGCTAACACGGCGAACAGTCTGTCAACTCAGAAAGTGCCTCTGGGAATTCCTGTGGGAATTCGTGCTGTGAATAAGAATCCATATCAGCCTCATCAACGACTGCAGAGGCCCCAGCTTCGGATGAGGACGCCAGGCCAGAAGATACAGTTGCGGAAGCGTTCTCCGGTTAACTCAGATTCGTCGCCTTCTGAGAGAGAATCGTCACCGGTTTCGAGTGATAGTTTTCCACCGGGCACATATGAGCCGAAGAGGCCTAGAATGCCAAGAGTGATCAATTCTGATGCCGTGCCTGTGGAAACGAAGAATAAAGGTTGGGGGAGTGCTATTAGGGAATTGACGCAGGCGATACTGAAATTCGGGGAAGCATATGAAAAAGCAGAGAGCTCGAAGATTCAGCAAGTTGCTGAAATGGAGAAGCAGAGGATGAAATTTGACAAGGAGATGGAATTGCAGAGAATGCAGTTCTTCATGAAGACCCAGCTGGAGTTATCGCAGCTGAAGCGTGGTAAGAGGGGGGGAGGAGGAGGAGGAGGAAACGCCAGCAACATCAGCAGTAACATTAACAACCATAGTCAGAGTGATAACCTGGTTAGATTGGATTAG 1122 0.5294 MESEDKIQSSHSPTSESPGSPRANGRITVTVAAPAPFPPQNSLALALPVQNQQPKGNGGGGGGREDCWSEGATAVLIDAWGERYLELSRGNLKQKHWKEVADIVSSREDYRKTPKSDIQCKNRIDTVKKKYKLEKSKIAAGGGPSKWPFYERLDQLIGPTAKISGSSGGAAAGANTANSLSTQKVPLGIPVGIRAVNKNPYQPHQRLQRPQLRMRTPGQKIQLRKRSPVNSDSSPSERESSPVSSDSFPPGTYEPKRPRMPRVINSDAVPVETKNKGWGSAIRELTQAILKFGEAYEKAESSKIQQVAEMEKQRMKFDKEMELQRMQFFMKTQLELSQLKRGKRGGGGGGGNASNISSNINNHSQSDNLVRLD 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1220 373 MobiDBLite consensus disorder prediction 351 373 - -
Lele39g1220 373 MobiDBLite consensus disorder prediction 339 373 - -
Lele39g1220 373 MobiDBLite consensus disorder prediction 223 248 - -
Lele39g1220 373 MobiDBLite consensus disorder prediction 10 24 - -
Lele39g1220 373 FunFam trihelix transcription factor ASIL2 68 133 - -
Lele39g1220 373 MobiDBLite consensus disorder prediction 160 268 - -
Lele39g1220 373 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 31 343 IPR044823 -
Lele39g1220 373 MobiDBLite consensus disorder prediction 169 185 - -
Lele39g1220 373 MobiDBLite consensus disorder prediction 1 68 - -
Lele39g1220 373 Pfam Myb/SANT-like DNA-binding domain 65 156 IPR044822 -
Lele39g1220 373 Gene3D - 68 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1220 Lele-ChrLele39 20855374 20856495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g1220 1 365 Trihelix Transcription Factor Family AT3G14180 46.325 3.87e-97 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele39g1220 Myb_DNA-bind_4 4.4e-26 CL0123