Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1208 ATGGCCGTAGATCCGCAATCCTCCGGCCAACTCTCCTCTTTCTCTCCACCTTCTTCATGGTTTTTCTGTTGGCGAATTCAATGTCAGAAGCTCAATCTTTCGTTAATTTTAAAGCCTCATTCTCAAGCTCTGAAAGACTGGGTGGTTAACTCTGTTCCTTGCAAACAAGGGGAGGAATGGGACGGGGTTATCTGCAACTGTGGATTCATCTCTGGCATTCGATTAGAAGGAATGGGGTTGTCGGGGAACATCAATAATAGGTTTCTTGAGAGCTCTATACTAGTCGGGAAATCATTTTTCCGGCGAGATTCCGTCGGATTTCTTCCAGAAAATGAGGTCTCTGAAGAAACTATGGCTAACGACAACAACTTTACGGGTCAGATTCCTCTACTTCTCGAGCTACGCCCTGAGAACAATCAGTCTAGCGGTAACCTCCCGAATCTGAGCAAAACACTGCTGATGGAATTCAATCTGAACCGCCAAAACCCATGGAAAATATGGAACAAGAACAAAGCATTGCATCTGATTCAAACTCTAGAAGATAGTCGCCATTGTTGTTGCATCAATGGTAGTACTTCTCTCACTTATAGCTCTACTCTTTGTTCGTTCAAGAAAAATAAGAAGGAGAAGGGAATACTGGGTTCAGTCCGATCAGAGAACAACAACGAAGAATCATCCGCATCAGTGGAAGTTCAGGTTGCTGCACCAGGGAAGAAAGAAGAGACTAGCCTATCCAGAAAATCAAGTAGTAATGGTTCCATCAGAAGGGGTAAGGGTGGCGGCGGCAATGGTGGCGTTGGAGATCTTGTGATGGTGAATAGTGAAAGGAGTGTGTTCGGGATGCTGGATTTGATGAAGGCAGCAATGGAAGTTTTGGGGAGTGGAGGGTTTGGATCATCCTATAAAGCAGTGATGGCTGATGGGGTTGCAGTGGTGTTGAAGAGGATGAGGGAGATGAATGTGTTGACGAAAGATGGGTTTGACGCAGAGATGAGGAAGCGTGGGAGTTTCAGACATAGGAATATCTTAACCCCTTTGGCTTATCATTATTGGAAGGATGAGAAGTTGGGGGTGTCTGAGTTTGTTCCTAAAGGGAGTCTGCAATATTTGCTGCATGGCAAAGACTTCGATCTCCTCCTCGTCCTCCTCGCTGGTTTTAAACTTAAATGCATTATAGTTAAGAGGCGGATTAGCGATCGTGATCGTGGACCATCCCATGCTGAAATGGACTGGCCTACTGCTTTAAAAATTGTACGAGGGATTGGTGAAGGTATGCTTTATCTCCAAACACAGCTTGCTTCATCTGTTTTACCTCATGGTAATCTCAAGTCTTGCAATATTCTCCTTGGTCCTGATTATGAGCCGATGCTAGTTGATTTTGGGTTATGCTCTTTGATCAGCCCTTCTAATCTAAGCCAAGCCCTATTTTCTTACAAGACTCCTGAAGCCTCTCCAAAATCTGATGTTTATTGTCTGGGAGTTGTCATTGTTGAGATCCTCTCTGGGAAATTCCCTTCCCAATATCTCAACAACAACGGTGGAATTGATGCAGTTCAATGGGCTAAACTCAACAATATCTGA 1581 0.444 MAVDPQSSGQLSSFSPPSSWFFCWRIQCQKLNLSLILKPHSQALKDWVVNSVPCKQGEEWDGVICNCGFISGIRLEGMGLSGNINNRFLESSILVGKSFFRRDSVGFLPENEVSEETMANDNNFTGQIPLLLELRPENNQSSGNLPNLSKTLLMEFNLNRQNPWKIWNKNKALHLIQTLEDSRHCCCINGSTSLTYSSTLCSFKKNKKEKGILGSVRSENNNEESSASVEVQVAAPGKKEETSLSRKSSSNGSIRRGKGGGGNGGVGDLVMVNSERSVFGMLDLMKAAMEVLGSGGFGSSYKAVMADGVAVVLKRMREMNVLTKDGFDAEMRKRGSFRHRNILTPLAYHYWKDEKLGVSEFVPKGSLQYLLHGKDFDLLLVLLAGFKLKCIIVKRRISDRDRGPSHAEMDWPTALKIVRGIGEGMLYLQTQLASSVLPHGNLKSCNILLGPDYEPMLVDFGLCSLISPSNLSQALFSYKTPEASPKSDVYCLGVVIVEILSGKFPSQYLNNNGGIDAVQWAKLNNI 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1208 526 MobiDBLite consensus disorder prediction 215 267 - -
Lele39g1208 526 Pfam Protein tyrosine and serine/threonine kinase 289 512 IPR001245 GO:0004672|GO:0006468
Lele39g1208 526 SUPERFAMILY Protein kinase-like (PK-like) 289 513 IPR011009 -
Lele39g1208 526 MobiDBLite consensus disorder prediction 215 229 - -
Lele39g1208 526 ProSiteProfiles Protein kinase domain profile. 286 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g1208 526 Gene3D Ribonuclease Inhibitor 30 175 IPR032675 -
Lele39g1208 526 SMART tyrkin_6 286 526 IPR020635 GO:0004713|GO:0006468
Lele39g1208 526 Gene3D Transferase(Phosphotransferase) domain 1 281 523 - -
Lele39g1208 526 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 119 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1208 Lele-ChrLele39 20769384 20771360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g1208 44 522 Receptor kinase-like Gene Family AT3G42880 35.993 2.89e-94 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele39g1208 PK_Tyr_Ser-Thr 1.6e-16 CL0016