Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1168 ATGCCTCTAATTCGACGGAGAAAAGGCGGAGAAGCTACAGAGTCGAAGATTCAGAGCGAAAGGACAGAAGAACAAGAAGATGATAAAAAGAAGGTAGCGGCGAAGCAGAGCAAGAAAGAGGAGAAGAAGAGCAAATGGTCTTGTGTGGATAGCTGTTGTTGGTTCATCGGTTGCATTTGTACTGTATGGTGGTTGTTGCTGTTTCTATACAAAGCTATGCCAGCTTCTTTTCCTCAGTATGTGACGGAGGCGATAACTGGACCGTTGCCGGACCCACCTGGTCTGAAACTGAAGAAAGAAGGATTGACCGCGAAGCATCCGGTGGTCTTCGTGCCGGGGATCGTTACCGGGGGCCTCGAGCTTTGGGAGGGTCACCAGTGTGCTGAGGGCTTGTTCCGGAAACGATTGTGGGGTGGTACATTTGGAGAAGTCTACAAAAGACCTTCATGCTGGGCAGAGCACATGTCACTGGACAATGAGACAGGATTAGATCCAGCTGGCATTAGAGTCAGGCCTGTCTCTGGACTTGTAGCTGCTGATTACTTTGCTCCAGGATATTTCGTTTGGGCTGTTCTAATAGCTAACTTGGCTCGCATTGGTTATGAAGAAAAAACCATGTACATGGCTGCATATGATTGGAGAATATCATTTCAGAACACCGAGGTGCGTGATCAATCACTAAGTCGGATAAAAAGCAACATAGAACTTTTGGTTGCTACTAATGGAGGCAAAAAGGCTGTTGTCATCCCTCATTCCATGGGTGTGCTTTACTTTCTTCATTTTATGAAGTGGGTTGAAGCACCTGCTCCAATGGGTGGTGGAGGTGGACCAGATTGGTGTGCCAGACATATAAAGGCAGTGATGAACATTGGTGGACCATTTTTGGGTGTTCCAAAGTCTGTGGCTGGACTTTTCTCGGCTGAAGCCAGGGATATTGCTGTTGCCAGGGCAATTGCACCAGGTTTCTTAGATAATGATATGTTTCGCTTTCAAACCTTGCAACATGTAATGAAGATGACTCGCACTTGGGATTCAACAATGTCCATGATACCAAGAGGTGGAGACACCATATGGGGTGGTCTTGACTGGTCGCCAGAGGAAGGCTATCTCCCTAGCAAGAGAAAGCAAAATCAAAATGATACTCAGTGGACAAGCCAAAACACTAATAACTCAACAATTTCTCAATCTAAACCTGTCAACTATGGGCGGATCATATCATTTGGCAAGGATGTGGCAGAAGCACCTTCTTCTGAGATAGAGAGGATTGACTTTCGGGGTGCCATTAAGGGTCCAAGTATTGCAAATACCACCTGTCGTGATGTCTGGACTGAATACCATGACATGGGAGTTGAGGGAGTCAGAGCTGTTGCTGAGTATAAAGTTTATACTGCTGGCTCTATTGTAGATCTGCTTCGTTTTGTTGCTCCAAAAATGATGGCTCGTGGCAGTGCTCATTTCTCTTATGGAATTGCTGACAATTTAGATGATCCAAAATACGAGCACTACAAATATTGGTCAAACCCCTTGGAGACAAAATTACCAAATGCTCCTGATATGGAAATATTTTCTTTATATGGAGTTGGCATACCAACTGAAAGAGCTTATGTTTACAAGTTATCTTCCTATGCTGAGTGTTACATTCCTTTTGAAATCGATACTTCAGCAGAAGGTGATGATGAGGATAGCTGTCTGAAGGATGGAGTTTATACAGTTGAAGGGGACGAGACAGTGCCTGCTCTGAGTGCAGGTTTCATGTGTGCTAAAGGTTGGCGTGGGAAAACCAGATTCAATCCTTATGGAGTCCGTACGTACATTAGGGAATATGACCATTCTCCTCCGGCCAACCTTCTTGAAGGCCGGGGCACTCAGAGTGGTGCTCATGTTGACATCATGGGCAATTTTGCATTGATTGAGGATGTTATTAGGGTGGCTGCTGGGGCCACCGGAGAAGAACTGGGAGGTGATCAGGTATATTCAGACATCTTTAAATGGTCTGAAAAAATTAAGTTGCAACTGTGA 2019 0.4522 MPLIRRRKGGEATESKIQSERTEEQEDDKKKVAAKQSKKEEKKSKWSCVDSCCWFIGCICTVWWLLLFLYKAMPASFPQYVTEAITGPLPDPPGLKLKKEGLTAKHPVVFVPGIVTGGLELWEGHQCAEGLFRKRLWGGTFGEVYKRPSCWAEHMSLDNETGLDPAGIRVRPVSGLVAADYFAPGYFVWAVLIANLARIGYEEKTMYMAAYDWRISFQNTEVRDQSLSRIKSNIELLVATNGGKKAVVIPHSMGVLYFLHFMKWVEAPAPMGGGGGPDWCARHIKAVMNIGGPFLGVPKSVAGLFSAEARDIAVARAIAPGFLDNDMFRFQTLQHVMKMTRTWDSTMSMIPRGGDTIWGGLDWSPEEGYLPSKRKQNQNDTQWTSQNTNNSTISQSKPVNYGRIISFGKDVAEAPSSEIERIDFRGAIKGPSIANTTCRDVWTEYHDMGVEGVRAVAEYKVYTAGSIVDLLRFVAPKMMARGSAHFSYGIADNLDDPKYEHYKYWSNPLETKLPNAPDMEIFSLYGVGIPTERAYVYKLSSYAECYIPFEIDTSAEGDDEDSCLKDGVYTVEGDETVPALSAGFMCAKGWRGKTRFNPYGVRTYIREYDHSPPANLLEGRGTQSGAHVDIMGNFALIEDVIRVAAGATGEELGGDQVYSDIFKWSEKIKLQL 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1168 672 Pfam Lecithin:cholesterol acyltransferase 471 632 IPR003386 GO:0006629|GO:0008374
Lele39g1168 672 Pfam Lecithin:cholesterol acyltransferase 132 386 IPR003386 GO:0006629|GO:0008374
Lele39g1168 672 MobiDBLite consensus disorder prediction 7 36 - -
Lele39g1168 672 SUPERFAMILY alpha/beta-Hydrolases 104 619 IPR029058 -
Lele39g1168 672 FunFam Phospholipid:diacylglycerol acyltransferase 1 152 340 - -
Lele39g1168 672 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 24 666 - -
Lele39g1168 672 MobiDBLite consensus disorder prediction 371 395 - -
Lele39g1168 672 MobiDBLite consensus disorder prediction 368 395 - -
Lele39g1168 672 MobiDBLite consensus disorder prediction 1 36 - -
Lele39g1168 672 Gene3D alpha/beta hydrolase 146 336 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1168 Lele-ChrLele39 20361046 20366233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g1168 148 672 Acyl Lipid Metabolism Gene Families AT5G13640 78.476 0.0 867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g1168 39 20361046 20366233 Lele41g1009 41 19426959 19427525 CCT
Lele39g1168 39 20361046 20366233 Lele42g0971 42 22387317 22387778 CCT
Lele39g1168 39 20361046 20366233 Lele43g0386 43 3454899 3455465 CCT
Lele39g1168 39 20361046 20366233 Lele44g0387 44 2825283 2825849 CCT
Lele39g1168 39 20361046 20366233 Lele39g1168 39 20361046 20366233 ECH
Lele37g0257 37 2042894 2048578 Lele39g1168 39 20361046 20366233 hybridization