Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1139 ATGGGACTACGTAAATTAAGATCAAAGCTTAAAAGGAGCCATCTTTACACATTTGCTTGTCTTAGGCGACCTCACACTGCACAGGAGATTGCTCAAAACCTTGAAGGTCCTGGTTTTTCAAGAGTTGTACATTGCAACCACCCTCATCTCCCTGAAAAGAAGCCTCAGATTTACTGCCGGAATGATATATCAACCACAAAATACAATGTGGCAACATTTTTACCTAAGGCACTTTATGAGCAATTTCGACGGGTTGCTAATATATACTTCCTTGTGGCTGCATGCCTCTCAGCCTCTCCAATCTCACCATTCTCTCCAATCAGCATGATTGCTCCTTTGGCATTTGTTGTTGGGCTTAGTATGGCAAAGGAAGCATTGGAAGATTGGCGCAGGTTTCATCAGGATGTCAAAGTTAATCACCGGCAAGCTAGTGTCCATAAAGGCAATGGTGTTTTCGCTCTCACGCAATGGCAAGACATTGTGGTTGGGGATGTCATAAAAGTAGATAAGGATCAATTTTTTCCTGCTGATTTGCTTTTCTTGTCATCAAGTTATGAGGATGGGATATGCTATGTGGAAACTATGAATTTAGATGGTGAGACAAACTTAAAGGTGAAAAGATCTTTGGAGGTTACTATGCTTCTTTATAATGACGAATCTTTTAAAGATTTCACAGGAATAATTCGTTGTGAAGACCCAAATCCTAGTCTCTACACATTTGTTGGAAATTTTGAGTATGAACGTGAGGTTCATCCGATTGAGCCCAGTCAAATTCTCCTCCGAGATTCGAAGCTCAGGAACACTGATTTCATATATGGAGTGGTCATTTTCACTGGTCATGAAAGCAAAGTGATGCAGAATTCTACAAAATCCCCTTCAAAAAGGAGCAGAATAGAGAAAAAGATGGATTACATCATATACCTTCTATTCACTGTTCTTATTTTGATATCCTTGGTCAGTTCAGTAATATTCGCGGTAATCACTAGATTCCAAACAATAAATTGGTGGTATTTAATGCCCATGCAATCAGAAGTCCTGTATGATCCCAATAATGCTCCATTGGCTGGGTTGAGTCATCTAGTTACTGCACTCATTCTTTATGGATATTTGATACCCATATCACTTTATGTTTCAATTGAGGTTGTGAAGGTTTTACAAGCAAACTTGGTTGAACAAGACTTGCACATGTATCATGAAGAAACTGGGACTCCTGCTTCTGCCCGAACATCAAATTTGAATGAAGAGTTGGGTCAAGTGGACACTATACTTTCTGATAAGACTGGAACTTTAACTTGCAATCAGATGGATTTTTTAAAGTGCTCCATTGCTGGTGCTGCATATGGTGTGAGTTCCAGTGAAGTTGAACTTGCTACAGCACAGCAGATGGCTCTTGAACTTGAGGAGGACCAGCACGACAGTCTTTCCAATACACCCACACATGAGGGTAAGGCATCTGTTTCATGGGAACATGTTGACCTGGAGACTGTTGTTACTTCCAAGGGTGATGAGGCTCAGAAGGCTACTATAAAGGGTTTCAGATTTGAGGACAGTCGCCTCATGAATTGTAACTGGTTGAAAGAGTCCAATACTGATGTCCTTTTATTGTTTTTTCGAATATTATCTGTTTGCCATACTGCTATTCCTGAGCTGAATGAGGAGACAGGAGTTTTAACTTATGAGGCTGAATCCCCTGACGAAGGGGCTTTCTTAGCAGCATCAAGAGAATTTGGTTTTGAGTTTTGTAAAAGAACTCAATCAAGTGTTTTCATCCGTGAAAAACTTTCACCTTCAGAACAAGCTGTTGAGAGGGAGTACAAAATCCTGAATCTATTGGACTTTACTAGCAAAAGAAAGAGAATGACAGTGATTGTGCGTGATGAGGAGGGAAGTTTACTTCTTATGTGCAAAGGGGCTGACAGTATCATATTTGATCGATTGGCGAAGAATGGAAAGAAGTATTTGGAGGCTACAACAAAACACTTGAACGAATATGGAGAGAATGGTTTGAGAACATTGGCTCTAGCTTACAGAAAGCTTGATGAGGAAGAGTACAATGCTTGGAACAAGGAGTTTCAGAAAGCCAAAACGACTGTTGGGCCTGACAGAGAGGCAGAGCTTGAGGAATTAGCTGAAAGAATGGAAAGAGAGCTGATTCTTGTTGGGGCTACCGCTGTGGAAGATAAACTGCAAAATGGGGTTCCCCAATGCATTGATAAACTTGCACAAGCAGGTCTCAAGATCTGGGTTTTGACAGGGGATAAGATGGAAACTGCAATCAACATCGGTTTTTCTTGTAGTTTGCTTCGACAGGGCATGAAACAGATCTGCATATCTATTCCAGAGGCAGACTCAGTTACCAATTTTGACAAAGAGGTCATTAAGGAGAGCATTTTGAATCAAATCATCAATGCCTCACAAATGATAAAGCTGGAGAAAGATCCACATGCTGCATTTGCATTAATTATTGATGGGAAGGCTCTGGCTTATACTTTAGAAGATGATATGAAGCATCAATTTTTGGGATTGGCTGTTGATTGTGCCTCTGTCATCTGTTGTCGTGTGTCTCCCAAGCAAAAGGCATTGGTAACAAGGTTAGTTAAAGAAGGCACTGGGAAGACCACTTTAGGAATAGGTGATGGTGCAAATGACGTTGGCATGATTCAAGAAGCAGATATTGGTGTTGGTATTAGTGGGGTTGAAGGTATGCAGGCAGTGATGGCTAGTGACTTCGCTATTGCCCAATTTAAATATTTGGAACGACTTTTGGTAATCCATGGACACTGGTGCTACAAGAGAATAGCTCAAATGATATGCTATTTCTTCTACAAAAACATAGCTTTTGGACTCACCATCTTCTATTTTGAGGCCATGACGAGCTTCTCTGGGCAATCTGTTTATGATGACTGGTACATGATATTGTTCAATGTTGTTCTTACATCATTGCCTGTCATTTCACTTGGAGTTTTTGAACAAGATGTTCCATCAGAAGTTTGCTTACAGTTTCCTGCACTATATCAGCAAGGCCCAAGAAATCTGTTCTTTGACTGGTATAGAATATTGGGATGGATGCTCAATGGTCTATTTTGCTCCCTTGTTGTCTTCTTATTCAACATCTGCATTTTCTATGACCAAGCCTTCCGAGTGGATGGCCGGACCCCGGACATGGCTATTGTCGGTACCACGATGTTCACTTGCATCATATGGGCTGTCAACTGCCAGATTACCCTCACCATTTGCCATGTCACATGGATGCAATACATATTCATCATAGGTAGTATAGCCTTTTGGTACATATTCCTGGTGCTATATGGCATGCTTTCCCCAACTTATTCGAAAACCGCCTACCAAATCCTGCTTGAAGTTCTTTCTCCTGCACCAATGTATTGGTTGGCGACTTTTCTAGTAACAGTTACTTGTAATTTCCCTTATTATATCCATATATGCTTTCAAAGATGGAAAAATCCCTTGGATCATCACATTATCAGAGAGATCAAGCACTACAAGAAGGATGTAGAGGACCAACGCATGTGGAAGAGGGAAAGGTCTAAAGCAAGACAGAAAACCAACATTGGATTCAGTGCAAGAGTTGAAGCTAAGATGAGAAATTTGAAGCAGAAGCTGCAAAAGAAGCAATCAGCCTTGCCTTTCCTGTCTTCTCCAACTGGACATTTTAAATAA 3678 0.4078 MGLRKLRSKLKRSHLYTFACLRRPHTAQEIAQNLEGPGFSRVVHCNHPHLPEKKPQIYCRNDISTTKYNVATFLPKALYEQFRRVANIYFLVAACLSASPISPFSPISMIAPLAFVVGLSMAKEALEDWRRFHQDVKVNHRQASVHKGNGVFALTQWQDIVVGDVIKVDKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRSLEVTMLLYNDESFKDFTGIIRCEDPNPSLYTFVGNFEYEREVHPIEPSQILLRDSKLRNTDFIYGVVIFTGHESKVMQNSTKSPSKRSRIEKKMDYIIYLLFTVLILISLVSSVIFAVITRFQTINWWYLMPMQSEVLYDPNNAPLAGLSHLVTALILYGYLIPISLYVSIEVVKVLQANLVEQDLHMYHEETGTPASARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGAAYGVSSSEVELATAQQMALELEEDQHDSLSNTPTHEGKASVSWEHVDLETVVTSKGDEAQKATIKGFRFEDSRLMNCNWLKESNTDVLLLFFRILSVCHTAIPELNEETGVLTYEAESPDEGAFLAASREFGFEFCKRTQSSVFIREKLSPSEQAVEREYKILNLLDFTSKRKRMTVIVRDEEGSLLLMCKGADSIIFDRLAKNGKKYLEATTKHLNEYGENGLRTLALAYRKLDEEEYNAWNKEFQKAKTTVGPDREAELEELAERMERELILVGATAVEDKLQNGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFSCSLLRQGMKQICISIPEADSVTNFDKEVIKESILNQIINASQMIKLEKDPHAAFALIIDGKALAYTLEDDMKHQFLGLAVDCASVICCRVSPKQKALVTRLVKEGTGKTTLGIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFAIAQFKYLERLLVIHGHWCYKRIAQMICYFFYKNIAFGLTIFYFEAMTSFSGQSVYDDWYMILFNVVLTSLPVISLGVFEQDVPSEVCLQFPALYQQGPRNLFFDWYRILGWMLNGLFCSLVVFLFNICIFYDQAFRVDGRTPDMAIVGTTMFTCIIWAVNCQITLTICHVTWMQYIFIIGSIAFWYIFLVLYGMLSPTYSKTAYQILLEVLSPAPMYWLATFLVTVTCNFPYYIHICFQRWKNPLDHHIIREIKHYKKDVEDQRMWKRERSKARQKTNIGFSARVEAKMRNLKQKLQKKQSALPFLSSPTGHFK 1225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1139 1225 Gene3D - 420 432 IPR023214 -
Lele39g1139 1225 Gene3D - 433 458 IPR023299 GO:0000166
Lele39g1139 1225 PRINTS P-type cation-transporting ATPase superfamily signature 423 437 - -
Lele39g1139 1225 PRINTS P-type cation-transporting ATPase superfamily signature 877 896 - -
Lele39g1139 1225 Coils Coil 449 469 - -
Lele39g1139 1225 SUPERFAMILY Calcium ATPase, transduction domain A 146 287 IPR008250 -
Lele39g1139 1225 Pfam Cation transport ATPase (P-type) 543 646 - -
Lele39g1139 1225 ProSitePatterns E1-E2 ATPases phosphorylation site. 425 431 IPR018303 -
Lele39g1139 1225 FunFam Phospholipid-transporting ATPase 587 718 - -
Lele39g1139 1225 SUPERFAMILY HAD-like 411 921 IPR036412 -
Lele39g1139 1225 Pfam Phospholipid-translocating P-type ATPase C-terminal 905 1155 IPR032630 -
Lele39g1139 1225 SUPERFAMILY Calcium ATPase, transmembrane domain M 54 1153 IPR023298 -
Lele39g1139 1225 SFLD C1.7: P-type atpase like 406 928 - -
Lele39g1139 1225 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 849 958 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele39g1139 1225 FunFam Phospholipid-transporting ATPase 720 917 - -
Lele39g1139 1225 CDD P-type_ATPase_APLT_Dnf-like 60 1036 - -
Lele39g1139 1225 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 34 1181 - -
Lele39g1139 1225 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 58 1163 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Lele39g1139 1225 SFLD p-type atpase 406 928 IPR044492 -
Lele39g1139 1225 Gene3D - 584 697 IPR023299 GO:0000166
Lele39g1139 1225 Coils Coil 1193 1213 - -
Lele39g1139 1225 FunFam Phospholipid-transporting ATPase 119 289 - -
Lele39g1139 1225 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 519 683 IPR023299 GO:0000166
Lele39g1139 1225 Gene3D - 115 289 - -
Lele39g1139 1225 Gene3D - 716 917 IPR023214 -
Lele39g1139 1225 Pfam Phospholipid-translocating ATPase N-terminal 43 110 IPR032631 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1139 Lele-ChrLele39 19963555 19969117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g1139 1 1219 Primary Pumps ATPases AT1G17500 71.124 0.0 1824