Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1131 ATGTCCTCCAAAACCGTGCACTATAAAAGAGGAGCCAAGTGCCCATTCAACGCACAAAACTCATCGGGTTTCAGCTCTACACAGAGATCAAAACATAAAGAGCCCAACTTTTTCACTTTCAGAGGAATGGAAATGCCAGCTCTAAGAATTGCAGGCATACATCAGAGCGAGGATGAAGAAGAGATGGAGTTGAGGATTTCAAGTAGCTTAATTAAGAAGCCAAATATCAATGAGTTATGTGGTGACGATAAGCTTGAAAGGTTCGATGAGAAGAATGCAAGAGAAGAATCTAAATGCGAAGAGAGAAAAAAGGTGATGAAAGCTGAAAAGCTTCAAAATGCACTGCTCTTGGTCGGATTTCTGGCTTCACAGGATTATCACTTGGAGGGGTGGAAAGCATTGTACTCAGGTGGGGATAAATGGAGAAGGACTACTAGTAATGAATCACGAAGTGAGAAATCAAAAGTTTCAAAGTGGGCGCGAATAGGTAAAATCGCTGCAAAGGTGGGAAAAGGTTTGTCCAAAGATGACAAGGGCCAGAAGTTAGCTCTCAGACACTGGCTTGAAGTTGTAGACACACACCATCGTTATGGTCACAACCTGCAATTCTACTATAGTGTTTGGGTTCGTAGCCATAGTTCTCAACAATTTTTCCACTGGTTGGATGATGGCGACGGCAAAGATTTAGATCTGGAGAAGTGCCCAAGAAGTGAATTACAAAAACAGTGCATTCACTACTGCAAACCTGAAGAGAGGAAAGCATATGAAGTGATGATAAAAAAAGGGAAGCTTGTGTACAGGCAAAGCAAGGTTCCCGTACACACACCTGAAGGATCAAAGTGGATATTTGTACTGAGCACTTCAAGAACTTTGTACATTGCAGAGAAGAAGAAAGGTTTCTTTCATCACTCCAGTTTTCTTGCTGGTGGTGCCACCATTGCTTCTGGCAGATTGGTGGCTTCCCATGGACTCCTTCATGCTATATGGCCCTATAGTGGTCATTATTGTCCAACATCGAAGCAATTTCAGGAGTTCATTAACTTCTTGGAAAAGCATAATGTGGACTTGACAAATGTGAAGAAACATGCAGTGGATGATGATGTGCCTCCATCAAAACCAGTTGTGGAGGAAGAATTATTACAGTTTGATTGCAGAGCTGATAATAATGTTAATGCTTGTGGAAGAGAAGAAGCCATTAATGTGGAATCTTCATCACAAGTAGCGAAAGAGAAGGAGCCATTATTAGTAGTGTCGTCAAGCAAAAGGACAACTTGTGGAACTGTTGGTCCAAGGATCAATGGTTATAAGTACCCCATATCAATAAAAGTGCCAGTTGAAGAATTTGAAAGGCTGCATGTATCAGCTAGGGCTAACGTTGGCCATGGAAAACTTTGCAGAAAAGCATCTATACCTATAATACATTCTCCTCCAAAACTCCATTTATCTTCTTCACCTGATAAGATCGTGCGTATAGAGCAATTTCCCACTCCAAGGCTACGTGTTCCTGCAAAGTAG 1515 0.4165 MSSKTVHYKRGAKCPFNAQNSSGFSSTQRSKHKEPNFFTFRGMEMPALRIAGIHQSEDEEEMELRISSSLIKKPNINELCGDDKLERFDEKNAREESKCEERKKVMKAEKLQNALLLVGFLASQDYHLEGWKALYSGGDKWRRTTSNESRSEKSKVSKWARIGKIAAKVGKGLSKDDKGQKLALRHWLEVVDTHHRYGHNLQFYYSVWVRSHSSQQFFHWLDDGDGKDLDLEKCPRSELQKQCIHYCKPEERKAYEVMIKKGKLVYRQSKVPVHTPEGSKWIFVLSTSRTLYIAEKKKGFFHHSSFLAGGATIASGRLVASHGLLHAIWPYSGHYCPTSKQFQEFINFLEKHNVDLTNVKKHAVDDDVPPSKPVVEEELLQFDCRADNNVNACGREEAINVESSSQVAKEKEPLLVVSSSKRTTCGTVGPRINGYKYPISIKVPVEEFERLHVSARANVGHGKLCRKASIPIIHSPPKLHLSSSPDKIVRIEQFPTPRLRVPAK 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1131 504 MobiDBLite consensus disorder prediction 15 31 - -
Lele39g1131 504 MobiDBLite consensus disorder prediction 1 31 - -
Lele39g1131 504 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 106 459 IPR044159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1131 Lele-ChrLele39 19806236 19810826 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g1131 39 19806236 19810826 Lele41g0972 41 19186723 19190421 CCT
Lele39g1131 39 19806236 19810826 Lele42g0941 42 22128535 22132420 CCT
Lele39g1131 39 19806236 19810826 Lele43g0424 43 3736594 3740295 CCT
Lele39g1131 39 19806236 19810826 Lele44g0416 44 3071895 3075862 CCT
Lele37g0294 37 2482981 2485162 Lele39g1131 39 19806236 19810826 hybridization
Lele38g0277 38 2201820 2203780 Lele39g1131 39 19806236 19810826 hybridization