Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1127 ATGTATAGTGCATTGAATCTCTCATTCTTCTTGACGTCTACTTCTGTGAAGAACAAAATGATGCCCCCTGGTCTCGTCTCCAATCTTCAACAGGCCCTGCTCAGCAGGAAAGGAGCCGAACAAGGCGACCAATCAGATAACGGTGCCGAAACCGCCCAACCTCCTTCTACTTCCGGGCCTGATTCCGCGGAGCTCAGTGATAGTTCGAAGCCTATTGTCCTGGTCACCAATAGTGAAGGAATTGAATCCCCTGGCCTTACTTACCTGGTTGAAGCTCTTGTTCGCGAAGGCCTCTACAATGTTCATATCTGCGTTCCTCAATCGGACAAATCAGCTGCAGGGCACTCTGTAACGTTCAGAGAAACGGTGGAAGCGAGTTCTGCTCAAATTGATGGTGCCATTGCGTTTGAGATTTCAGGAACTCCTGTGGATTGTGTTTCACTAGCGTTATCAGGGGCGTTGTTTTCATGGTCAAAGCCTATGCTGGTTATTAGTGGAATTACTAGGGGGTCGAGCTGCGGTCATCACATGTTCTACTCAGGTGTTGTTGCTGGAGCTAGAGAGGCATTACTTTGTGGTGTACCATCAGTGTCATTATCATTGAATTGGAAGAAGGATGAAAGTCAAGAAACAGATTTCAAGGACGCAGTAGCAGTTTGTTTACCAGTGATAAATGCAGCTGTAAGGGATATTGAAAAGGGAACTTTCCCCAAAAGCTGCTTTTTGAATATAGAAATTCCAACATCTCCTCTGGGTAACAAGGGTTTCAAATTGACCAAGCAAAGCATGTGGAGATCCACTCTAAACTGGCAAGCCGTTTCAAGTAGTCGCTACCCTCATGCTCATCACATGGCTAATCAACAAGGCCTTGGCCTTCAACTTGCGCAGCTTGGCCGAGATGCCTCTGCAGCTGGTGCAGCTCGTCGAATGACTACGCAGAAAAAGAATTTGGAGGTTGTTGAATCAGTTGGAGCTGCGGGAAAGCCTAAGTTCAGCAAAGTGAAGAAGTATTTCAGATTAGAGTTTTCGGAAAAGCAGCAGGAAGATCTAGAAGATGATCTGGATTATAGAGCACTTGAAAGTGGATTTGTTGCAGTAACCCCACTCTCCCTTTCTCCTCATGTTGAATCTGATATCCAAACGGCAGCTTCTGATTGGATCTCTACTGTGATTCCAAGTGAACAATGA 1188 0.4596 MYSALNLSFFLTSTSVKNKMMPPGLVSNLQQALLSRKGAEQGDQSDNGAETAQPPSTSGPDSAELSDSSKPIVLVTNSEGIESPGLTYLVEALVREGLYNVHICVPQSDKSAAGHSVTFRETVEASSAQIDGAIAFEISGTPVDCVSLALSGALFSWSKPMLVISGITRGSSCGHHMFYSGVVAGAREALLCGVPSVSLSLNWKKDESQETDFKDAVAVCLPVINAAVRDIEKGTFPKSCFLNIEIPTSPLGNKGFKLTKQSMWRSTLNWQAVSSSRYPHAHHMANQQGLGLQLAQLGRDASAAGAARRMTTQKKNLEVVESVGAAGKPKFSKVKKYFRLEFSEKQQEDLEDDLDYRALESGFVAVTPLSLSPHVESDIQTAASDWISTVIPSEQ 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1127 395 Pfam Survival protein SurE 73 265 IPR002828 GO:0016787
Lele39g1127 395 PANTHER 5'-NUCLEOTIDASE SURE 66 390 IPR030048 GO:0008252
Lele39g1127 395 MobiDBLite consensus disorder prediction 34 68 - -
Lele39g1127 395 Hamap 5'/3'-nucleotidase SurE [surE]. 71 391 IPR030048 GO:0008252
Lele39g1127 395 Gene3D - 62 388 IPR036523 GO:0016787
Lele39g1127 395 SUPERFAMILY SurE-like 72 381 IPR036523 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1127 Lele-ChrLele39 19775584 19780152 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0297 37 2509724 2526431 Lele39g1127 39 19775584 19780152 hybridization
Lele38g0280 38 2242708 2246480 Lele39g1127 39 19775584 19780152 hybridization