Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1125 ATGTCTTGTCTGTTACATGCTAGTAACGACGCAGTTGCGAATCTGAACCGTTCATTTTATCCGACGGTCAAGATTTGTTCAGTAAACTGTCATTTCATCTTCGCCTCCACCGGAACCACAACAATATTTGCACTACACGATCAGCTTCTTCTTTCTGGAAACAACAGAGCAGGACGAAGCAAGATGATATATAGTAAAAAGCAAGCAGGAACTGAGTTTCTCATTGAAGAAGCAAGAGTTGGAGATGCAAGTTCTACTTCAACATTCAAGGCATCAATGTGGGAAACACAAAATGTATACTTTGAAGTACTCTTGTATCTGTCCAATATAATGGCTTCTTCCTCCTCCTCCTCCTCCTCCCATATTCCTCGGAAAATGTATGATGTGTTCATTAGCTTTAGAGGTTCAGACATCAGGCATGATTTTCTTAGCCATTTGACAAAGGAGTTGCGTCGAGAGCAGATAGATTTCTATGTAGATGAGAGACTTGAAAGAGGGGACGAAGTATCATCAGCACTTGTAAAAGCAATAGAAGGATCAGTGATATCATTGGTGATATTCTCAAAAGACTATGCTTCTTCAAAGTGGTGCATGGAAGAGCTTGTCAAAATCATGGAATGCAAAGAAGCCAATCAACAGATTGTAATACCAGTTTTCTTCAATATACTTCCATCAGATGTCAGGTATCAAAAAGGCCCTGATGTAGATGCATTTGCTGAACATGAGGAGAGGTTCAAGGATAACATGGACATCCTGCAAATATGGAGATTTACTTTGAATAAAGCTGCTAACTTGTCTGGTTATCATTATTCATCGAATTCTCAGAATGAATCTGAACTCATTGATGAAATCCTTAAAGATGTCTTGAAAAATTTGGATGATATTTACCCTGTGGAACCAAAGTGCCTAGTTGGAGTTAATCAAAACTTGGCCTGTATTGAATCATTATTGAATATTGAGTCAGATGAGATTCAAAGTCTTGGAATTTGGGGGATGGGAGTGAAAGCAAGATTCAGAATGGCGAGGAAGAGAAGGCTGCGCTGGAGAAAGGTTCTTGTTGTTCTTGATGATGTTGACACCTCTGAACAATTAGAATATCTAATTGGAGAACAACTTTGCTTGGGACCAGAGGCAGTTAAGAGAAGGGGAAACATTCATGGCACCACTTGTAATCCAAAGATTTCATTTCAATTCTCTCTGCTTTATGAAAGTCCTATTTCATATGAGAGAGGGAAGGAAATCACTGATAGCCTCCTCAAAGCATGTGGAGTGTGCCCAATATATGCCTCAGAATATGACCAGTTTCTCCAACAGATTGAATTCAAGTTTGCGAGAGAAGGTTCGATCCATCCAGGGATGTCTGCTTTTGCTACTTCTTCCCATGTTCAGCGGAAAGAATACGATGTTTTTATCAGTTTTAGAGGTTCAGACATTAGATGTGGATTTCTTAGCCATTTGACAGAGCGGTTACAACGAAACTGTATAGATGCGTATATCGATGAGAGGCTAGAAAGGGGAGATGAAATATCATCTGCGCTTTTGGAAGCAATAGAAGGATCAATAATTTCGCTGGTGATATTCTCAAAAGACTATGCTTCTTCAAAGTGGTGCTTAGAAGAGCTAGTAAAAATCATGGAATGCAAGCAAGTCAAAAATCAGATTGTAATTCCAGTTTTCTATAATGTAGACCCATCACACGTTAGGCATCAAGAAGAATCTTATGCAAGTGCATTTACCCAACATGAGCAGAAGTTCAAAGGTGCATTTACCCAACATGAGCAGAAGTTCAAAGATGACTTAAACAAGTTGCAAATTTGGAGATCTATCTTGAAAGAAACTGCAGACTTATCTGGTTATCATTCTTCAAATTTTCTCAACGAATCTGATCTTGTTGATGTAATAATCAAAGATGTATTGAAAAAGCTTGAAGGTAAAGACAAAATTGAGGTAAAGCAATGGCTGATTGGATTTGAGGAAAATTTGGCTACTGTTGAATCATTTATGAAAGTAGACTCACAGGAAGTTGGAGTTCTTGGATTTTGGGGTAAAGGAGGGATAGGTAAAACAACCTTAGCTCGTGCCATATTTGACAAATTTTCCCGCCAATTTGATAGTTCTTTCTTTGCTTCAAATGTGAGAGAGGAATCGAAAAGGATTGGATTGACTTGTTTGCTCGAGAAGATTTTGTCTGCACTACTAAACAACGAAAGTCTCATAATGAAAGGAAGACCCAACATTCAAAGGAGGCTGCGTCGAATAAGAGTTCTTCTAGTGCTTGACGATGTAGACACTTCCAGCCAATTACAATATCTTATTGAAGAAAATCTTTCATTTGGACCAAGTAGCAAAGTCATCATAACAAGTAGAGACAGACATATTCTTGTTAGTGGAGGAGTTCATGTATTACATGAGGTGAAAGAATTAAACATGGAAGAATCACTTCAACTTTTCTGTCGACATGCTTTCAAGCAAGCCTATCCCAAAATGGGATATGAAAAGTTATCAGCACAGGCAATTCAATATGCAAGAGGCCTTCCTTTAGCATTAAAAATTCTGGGTTCATATCTGAACTCTAGAGATACAACAACATGGGAGAGTGCCCTCAAAAGATTCAGAAAGTATCCACATATGGAAATTCAAACTGTATTGAGGGTTAGCTATGATGGACTTGATATACCAGAAAAGAGGATATTCCTAGACGTTGCATTCTTCTTCAAGGGAGAAAAAAAAGAAGATATTATAAGGGTGCTAGATGCTTGTGACTTCTATGCGTATTGTGGAATAGATAGCCTTCTAGATAAAGCTCTCATAACCATTTCAAGAGACAATAGAGTAGAAATTCATGATCTCCTACAAGAGATGGCTGAAGAAATAGTTCGTGAGGAATCTATCGAGCATCCTGAAAGACGAAGCCGATTAAATGATGCAAAAGAAATTCGAGGTGTACTAAAAAATAACGAGGGGACGGATGGAATTGAAGGCATTGTATTGGATATTGAAAACACCCTATCCCTGAGTGCTGACACTTTCCAAAAAATGAGAAATTTAAGATTTCTCAAGATCAAAACTGACATAATGAAGATCGATCCTGATTTCGGAGATCATCATACTGTTCATCTTCCTGATGGTCTGCACTCACTTTCTAACAAGCTATGCTACTTTTGTTGGCAAAGTTATCCTTTGGAGTCTCTACCATCGGGGTTTTGTCCAGAACAACTTGTTGAAATCCATTTGGAAAGGAGCAAAATAAAAAAACTATGGGATGGTGTGCAGGATCTAATGAATTTGAAGATAATAAATCTCAGCTTTTCCCGAGGGTTAGAAGAGTTGCCTGATTTCTCCATGGCACAAAATCTTGAAACAGTGGACCTCGCATATTGTGAAAGGTTATATAGCATTCATCCATCTATCTTATCTCTTCCTAAACTTGTTTATTTGAATCTAAGATCTTGCCGGAAAATAAAGAATCTTCATGGAAAGAAGCATTTGAAATCTCTCAAGTATCTCATACTATCTCGCTGCTATAGTCTCGAGGAATTTTCGTTGTCATCTGATGAAATGACAAGTTTAGATTTAGATGGTACTGGCATCAAAACATTGAAGTTGCCAATTGGACGGTTCAAGAAACTTGAAGAGCTAAATCTCCGTCGGCTTCTCAGCTTTCAAATAAATGAGCTAAGTTGCCTGACGTCTCTTAAAATATTCTCTCTTTCTGAGTTTGAACGAGAAATTCACAAATCAAAATTACTCACTCTGTTTGATGCATGGCATTATTTAGAAGAATTGCGTTTGAGAAACTGTGTGGTTGATGAGATCCCAGACAATATCAATGGCCTGTCATCGTTGAAGGTTCTATCACTTCGAGGATGCACAGTGAAGAGTTTGCCTAATAGCATCAAGCATCTTTCAGAGCTGAAACAAATTGATTTGGGGGAATGCAAGAGGCTGAGGTCCTTACCAGAACTTCCACCTTCCATTACTCATTTTTATTTCGACGAATGCACGTCATTGGAGACTATCGATTTTACACTGATGCCAACAATATGTAACAACTCTTGTGAGGTTAAGGTTTGTTACCCAGGAAGCACAATTCCAAAGGGCTTCAACTATTCTCAAACGGCGAAGACTTCCATTACTATTGAGCTGGCACCATCTTCTTCTGACCATTTGTTGGGTTTTGCTTCTTGTTGTATTCTTTCTGCATGTGAGATAAACACTTCTGCACGAGTATTAGTTTGCAGAAGATTCCACTTTGAAGATGAAGAGATCAATCGCAAGGATGAAAAGCAATTCCCTGGCATCTGGATATTGAATACAGATCATGTTTATGTATGGTATGATCCAATGGAGCGCATACTAAAGGAAACCCAAAGAAGGCAATTTGATAAGGGCACCACTTCTAAGTTTGCATGTGAATTCTTCATGGGATATTACTATGACATTGATCGTGCGGTCGAATTTGATCACCACATAAAAGCGTGCGGAATTTGGCCAATATATGCATCGGAAGTTCAACAAATGGAATTAAAGATGGAGGTTACTGTTACAAGCAATACCAGTTGCTTCAATGAGAACCCAAATGCAGGAGTGGCCCAATATCAGCCAGCACCTTATTCCATTAGGAGAAGCATATGGGACTTGGGTCGTATGATGAGCCGCTTTTTAAGAACAAAGAGCAGCCGAGATGAGCTCACAGTCACAAAGGATATATGA 4713 0.3868 MSCLLHASNDAVANLNRSFYPTVKICSVNCHFIFASTGTTTIFALHDQLLLSGNNRAGRSKMIYSKKQAGTEFLIEEARVGDASSTSTFKASMWETQNVYFEVLLYLSNIMASSSSSSSSHIPRKMYDVFISFRGSDIRHDFLSHLTKELRREQIDFYVDERLERGDEVSSALVKAIEGSVISLVIFSKDYASSKWCMEELVKIMECKEANQQIVIPVFFNILPSDVRYQKGPDVDAFAEHEERFKDNMDILQIWRFTLNKAANLSGYHYSSNSQNESELIDEILKDVLKNLDDIYPVEPKCLVGVNQNLACIESLLNIESDEIQSLGIWGMGVKARFRMARKRRLRWRKVLVVLDDVDTSEQLEYLIGEQLCLGPEAVKRRGNIHGTTCNPKISFQFSLLYESPISYERGKEITDSLLKACGVCPIYASEYDQFLQQIEFKFAREGSIHPGMSAFATSSHVQRKEYDVFISFRGSDIRCGFLSHLTERLQRNCIDAYIDERLERGDEISSALLEAIEGSIISLVIFSKDYASSKWCLEELVKIMECKQVKNQIVIPVFYNVDPSHVRHQEESYASAFTQHEQKFKGAFTQHEQKFKDDLNKLQIWRSILKETADLSGYHSSNFLNESDLVDVIIKDVLKKLEGKDKIEVKQWLIGFEENLATVESFMKVDSQEVGVLGFWGKGGIGKTTLARAIFDKFSRQFDSSFFASNVREESKRIGLTCLLEKILSALLNNESLIMKGRPNIQRRLRRIRVLLVLDDVDTSSQLQYLIEENLSFGPSSKVIITSRDRHILVSGGVHVLHEVKELNMEESLQLFCRHAFKQAYPKMGYEKLSAQAIQYARGLPLALKILGSYLNSRDTTTWESALKRFRKYPHMEIQTVLRVSYDGLDIPEKRIFLDVAFFFKGEKKEDIIRVLDACDFYAYCGIDSLLDKALITISRDNRVEIHDLLQEMAEEIVREESIEHPERRSRLNDAKEIRGVLKNNEGTDGIEGIVLDIENTLSLSADTFQKMRNLRFLKIKTDIMKIDPDFGDHHTVHLPDGLHSLSNKLCYFCWQSYPLESLPSGFCPEQLVEIHLERSKIKKLWDGVQDLMNLKIINLSFSRGLEELPDFSMAQNLETVDLAYCERLYSIHPSILSLPKLVYLNLRSCRKIKNLHGKKHLKSLKYLILSRCYSLEEFSLSSDEMTSLDLDGTGIKTLKLPIGRFKKLEELNLRRLLSFQINELSCLTSLKIFSLSEFEREIHKSKLLTLFDAWHYLEELRLRNCVVDEIPDNINGLSSLKVLSLRGCTVKSLPNSIKHLSELKQIDLGECKRLRSLPELPPSITHFYFDECTSLETIDFTLMPTICNNSCEVKVCYPGSTIPKGFNYSQTAKTSITIELAPSSSDHLLGFASCCILSACEINTSARVLVCRRFHFEDEEINRKDEKQFPGIWILNTDHVYVWYDPMERILKETQRRQFDKGTTSKFACEFFMGYYYDIDRAVEFDHHIKACGIWPIYASEVQQMELKMEVTVTSNTSCFNENPNAGVAQYQPAPYSIRRSIWDLGRMMSRFLRTKSSRDELTVTKDI 1570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1125 1570 Pfam C-JID domain 1359 1505 IPR045344 -
Lele39g1125 1570 Gene3D - 122 296 IPR035897 -
Lele39g1125 1570 ProSiteProfiles TIR domain profile. 125 292 IPR000157 GO:0007165
Lele39g1125 1570 Pfam TIR domain 467 648 IPR000157 GO:0007165
Lele39g1125 1570 Pfam TIR domain 127 298 IPR000157 GO:0007165
Lele39g1125 1570 ProSiteProfiles TIR domain profile. 465 642 IPR000157 GO:0007165
Lele39g1125 1570 SUPERFAMILY Toll/Interleukin receptor TIR domain 459 619 IPR035897 -
Lele39g1125 1570 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 653 900 IPR027417 -
Lele39g1125 1570 FunFam Disease resistance protein (TIR-NBS-LRR class) 463 644 - -
Lele39g1125 1570 Pfam Leucine Rich Repeat 1072 1091 IPR011713 -
Lele39g1125 1570 SUPERFAMILY L domain-like 948 1358 - -
Lele39g1125 1570 SUPERFAMILY Toll/Interleukin receptor TIR domain 116 268 IPR035897 -
Lele39g1125 1570 FunFam Disease resistance protein (TIR-NBS-LRR class) 123 294 - -
Lele39g1125 1570 Gene3D - 463 643 IPR035897 -
Lele39g1125 1570 FunFam Disease resistance protein (TIR-NBS-LRR class) 809 891 - -
Lele39g1125 1570 Gene3D - 807 891 IPR042197 -
Lele39g1125 1570 Gene3D - 644 799 IPR027417 -
Lele39g1125 1570 PRINTS Disease resistance protein signature 749 763 - -
Lele39g1125 1570 PRINTS Disease resistance protein signature 677 692 - -
Lele39g1125 1570 PRINTS Disease resistance protein signature 1300 1316 - -
Lele39g1125 1570 PRINTS Disease resistance protein signature 842 856 - -
Lele39g1125 1570 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 467 1183 IPR044974 GO:0006952
Lele39g1125 1570 Pfam NB-ARC domain 672 877 IPR002182 GO:0043531
Lele39g1125 1570 Gene3D Ribonuclease Inhibitor 1186 1359 IPR032675 -
Lele39g1125 1570 Gene3D Ribonuclease Inhibitor 943 1185 IPR032675 -
Lele39g1125 1570 SMART till_3 126 265 IPR000157 GO:0007165
Lele39g1125 1570 SMART till_3 466 616 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1125 Lele-ChrLele39 19751884 19764041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g1125 125 356 WRKY Transcription Factor Family AT4G12020 29.536 9.88e-15 78.2