Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1113 ATGAGCCTCTCTCACAACTCCAACAACGATAACCCTAACAACCAGGCTTGTGCTGCTTGTAAATACCGTCGTAGAAAGTGTGCTCCTGATTGCATTCTTGCACCTTATTTCCCTTACGATCGCCAACGTCAATTCCTCAACGCCCATAAATTGTTTGGTGTCCGAAACATCACCCGAATCATCGAAAACCTCGACCCTCACAGGAGGAACGAAGCCATGCAAAGCATTATCTATCAATCTGACATGCGAGCTAGTGACCCCGTCAGAGGTTGTTACGGTCTCATTCAGCAGCTTAATGCTCAGATTCAATACCATAGAGCTGAACTCGACCTTGTTCTTCGGCACCTCGCTGTTTTCCGTCATTCTCATCATCATGAAGCTATCAATATTATCAATTCAGATCATTTGAATCTCTGTAACCCTAATATTGCACCATCATCGCAGCCTCCTCCTAGTCATTATCAAGATCCGTATATGATAGTTCAAGAACATCATCACAACAATGATGTGCATGTTCCTAATTTGCAGGACGATGATGTTAATTCTTGGGCCTTGCAGGATTACAATATGTCTTTGTCGTTGCACAACATTAAAAACGACGGCCATGATGATCAGAGTGGTTATGTAGGTGATGAATTGTACAATGATCAGAAATCTTCTCCGTCTCTTCTTGACAATATTCATTGTGATGATGATAGGAACGAGATTGGTTTTGAACCTGAAGAATTACTGGAACGCAGTGATGAAGCGATATTGTTCAAGATAGACAATGGAGTAGTAAATGAAGAGGTTAATTGCATTCAACAAGTTCAAGATCATGATCTAAAAGGTGCTGCAACCCTGTTTAAGCTCACAAATTGTACTAGCTGA 870 0.4149 MSLSHNSNNDNPNNQACAACKYRRRKCAPDCILAPYFPYDRQRQFLNAHKLFGVRNITRIIENLDPHRRNEAMQSIIYQSDMRASDPVRGCYGLIQQLNAQIQYHRAELDLVLRHLAVFRHSHHHEAINIINSDHLNLCNPNIAPSSQPPPSHYQDPYMIVQEHHHNNDVHVPNLQDDDVNSWALQDYNMSLSLHNIKNDGHDDQSGYVGDELYNDQKSSPSLLDNIHCDDDRNEIGFEPEELLERSDEAILFKIDNGVVNEEVNCIQQVQDHDLKGAATLFKLTNCTS 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1113 289 ProSiteProfiles LOB domain profile. 15 116 IPR004883 -
Lele39g1113 289 Pfam Lateral organ boundaries (LOB) domain 16 111 IPR004883 -
Lele39g1113 289 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 14 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1113 Lele-ChrLele39 19675114 19676210 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g1113 15 130 AS2 family AT3G13850 64.706 2.98e-52 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele39g1113 LOB 2.3e-36 No_clan