Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1112 ATGTCATCTTATGGAGTTCCTGCAAGTATCGCACTTCCACCTTCTAAGTCATTATCTAAGTCTCCAATAAAGGAACGGACCCACGGTTTAGTAGATTCTCCGATATTACATCATAGGCATCACCATTCCAGAAGAAAGTCCAATGAACCAGCAGAGCCAACTTACGCAGTTCATCCACCCACCTACAGTCCTCACGGTTCTTCTGTCTTCCAACCACAACCTCCTTTCTCTTCACCAGCGCGCTGGAAATTACCTGCACCTGCACCATCACCAGCAGTTCTATCAGGCCACTTGAATGGTTGTTTCCTTTGTCCATTAGTGCCCTCTCCTTCACCTGGAATTACACCTCAGGGTTTACCATTGAGGAAGATGAAGACTCCACCAAAAGCACCTGTTTTGGTTTTGCCACCTCCACCTCCTAATAAAGACTGTATATGGATGACTTGCTCAGAGCCCTTTACATATGCACCTCCTGGATCACTTTGCGGTTGTGTGTTTCCACTTCAAGTTAAGCTTCGCCTTGGTATTTCAATATACAAGTTCTTCCCATTGGTGTCAAAGCTAGCTGAGGAAATTGCCGCCAGTGTTTTACTGAATCATAACCAGGTTCGCATTGTCGGAGCTGATGAAGCTAGTCAGCAACTGGAGAAAACTATTGTTCTTGTAAACTTGGTACCCACAGGATCAAGATTTGATGATGCAACAGCATTTTCAATATATAAGAAATTCTGGCGCAGGGAGATCCACACAGATGCTTCCCTTTTCGGTGCCTGTGAAGTACTCTATGTTCATTATCCAGGTCTTCCTCCTTCTCCGCCTTCAATTCCCTCAAACATTGATAGCCCATTGTTCCCTGGTAATGACAACAATGGAACAATGATGAAACCTTTGGGAGTGGCCATACCAAGGAAAGAAAAGACAGGGAGTGGCAAAAACATGATTTTAGTAATTGTGCTGTCATCTTTAACAGCTTTTATTACTATTCTTGTTGGATTTGCATGGCTCTTTCTGACGAAATGTGGCCCTTGTGTTCGTGAGAGTAAACAAATTCCAACCACAATTCCATCCTCTTCAAAACTACCGGGGAGTGGCAGGTCATTGACTAATAGGAGAGTACCGGGATTTGGTTCCAAGTCCTTAAGTTCTCGAACTATAACATATACAGGATCTGCTAATACTTTTACTCTGAATGACATAGAGAAAGCAACAAACAACTTTGATGCTTCAAGAATATTAGGAGAAGGGGGCTTTGGGCCTGTTTATAAAGGGGTTCTATATGATGGAAGAGATGTGGCTGTGAAGATTCTCAAGAGACATGATCAGCATGGTGGCCGTGAATTCTTAGCAGAAGTCGAAATGCTTAGCCGTCTGCACCATAGAAATTTAGTTAAATTGATAGGTATATGCATAGAGAAACAGACCCGGTGCCTTGTCTATGAGCTTGTCCCTAATGGAAGTGTGGAATCCCACTTACATGATTTTGGACTAGCAAGAACTGCCCTGGATGAGGGAAACAAGCACATCTCCACACACGTTATGGGAACATTTGGGTAA 1554 0.4344 MSSYGVPASIALPPSKSLSKSPIKERTHGLVDSPILHHRHHHSRRKSNEPAEPTYAVHPPTYSPHGSSVFQPQPPFSSPARWKLPAPAPSPAVLSGHLNGCFLCPLVPSPSPGITPQGLPLRKMKTPPKAPVLVLPPPPPNKDCIWMTCSEPFTYAPPGSLCGCVFPLQVKLRLGISIYKFFPLVSKLAEEIAASVLLNHNQVRIVGADEASQQLEKTIVLVNLVPTGSRFDDATAFSIYKKFWRREIHTDASLFGACEVLYVHYPGLPPSPPSIPSNIDSPLFPGNDNNGTMMKPLGVAIPRKEKTGSGKNMILVIVLSSLTAFITILVGFAWLFLTKCGPCVRESKQIPTTIPSSSKLPGSGRSLTNRRVPGFGSKSLSSRTITYTGSANTFTLNDIEKATNNFDASRILGEGGFGPVYKGVLYDGRDVAVKILKRHDQHGGREFLAEVEMLSRLHHRNLVKLIGICIEKQTRCLVYELVPNGSVESHLHDFGLARTALDEGNKHISTHVMGTFG 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1112 517 PANTHER OS01G0750732 PROTEIN 136 491 - -
Lele39g1112 517 FunFam receptor-like serine/threonine-protein kinase ALE2 379 481 - -
Lele39g1112 517 Gene3D Phosphorylase Kinase; domain 1 378 481 - -
Lele39g1112 517 ProSiteProfiles Protein kinase domain profile. 406 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g1112 517 MobiDBLite consensus disorder prediction 21 36 - -
Lele39g1112 517 SUPERFAMILY Protein kinase-like (PK-like) 378 515 IPR011009 -
Lele39g1112 517 SMART tyrkin_6 406 516 IPR020635 GO:0004713|GO:0006468
Lele39g1112 517 MobiDBLite consensus disorder prediction 353 373 - -
Lele39g1112 517 MobiDBLite consensus disorder prediction 1 71 - -
Lele39g1112 517 Pfam Protein tyrosine and serine/threonine kinase 409 493 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1112 Lele-ChrLele39 19667493 19670099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g1112 141 502 Receptor kinase-like Gene Family AT5G56890 52.279 4.79e-117 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Lele39g1112 PK_Tyr_Ser-Thr 1.3e-17 CL0016