Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1102 ATGAGCAATGGATCTCAACGTCTTCTGGGTTGTGTTTGTGACAGCCTTAATTCTGTTCTTGTCCACTGTGGCTCTATGGGATGGCCTTTCATCGGTGAAACCGCCGATTATGTCTCCTCTGCTTATACTGTTGGCCCCGACGCCTTCATGGACAAGCGACGCACCATGTATGGGAAGGTGTTTAAATCGCACATGTTTGGGAGTCCAACAATAGTTTCGATGGATGCAGAAGTTAATAGATTTGTACTGCAAAGTGATGCAACAGTTTTTGTTCCATGTTATCCAAAGTCTGTGTCTGAGCTGATGGGGCAGTTCTCGATTCTGTCTATGAATGGAAGCCTTCACAGGAGAATTCATGGCCTCGCCAAAAAGAAAATGATCAAATTAGTGCAGAAAGTTATCCAAGCAAAGAGAGATAGAGGCGTCTCTAAGGTTCCAAAAGATGTAGTGGATGTGCTACTGAATGATGCAAATGAGCACTTCACTGATAAATTGATAGCAGATAATGTAATTGATATGATGATTCCTGGAGAAGACTCTGTTCCTGTTCTTGTTGCCATAGCTATAAAATACCTATCAGAATGTCCTCTTGCTCTGCAACAATTAACGGTTATTACAGAAACTTTGAGGATGGGGAATATTATAATGGGAGTATTCAGAAAGGCCATGAAAGATGTTGAAATAAAAGGGATTTTAATACCAAAAGGATGGTGTGTTTTTACATATTTTAGATCAGTTCATCTAGATGAAAGTAACTATGATCATCCTTACCAGTTTAATCCATGGAGGTGGCAAAACAAGGACATGAGCAGTTTCAGTTTCACTCCATTTGGTGGAGGACTAAGGCTTTGTCCTGGTCTTGACTTGTCCAGGCTTGAATCTTCCATCTTTCTCCACCACTTTGTTACTCAATTCAGATGGACAGCAGAAGAAGATGCAATTGTGAATTTCCCCACAGTAAGACTGAAAAGGAGAATGCCAATATGGGTAAAGAGAGTGAAGGATTTTGAGCTGCTTTGTTGA 1023 0.4086 MSNGSQRLLGCVCDSLNSVLVHCGSMGWPFIGETADYVSSAYTVGPDAFMDKRRTMYGKVFKSHMFGSPTIVSMDAEVNRFVLQSDATVFVPCYPKSVSELMGQFSILSMNGSLHRRIHGLAKKKMIKLVQKVIQAKRDRGVSKVPKDVVDVLLNDANEHFTDKLIADNVIDMMIPGEDSVPVLVAIAIKYLSECPLALQQLTVITETLRMGNIIMGVFRKAMKDVEIKGILIPKGWCVFTYFRSVHLDESNYDHPYQFNPWRWQNKDMSSFSFTPFGGGLRLCPGLDLSRLESSIFLHHFVTQFRWTAEEDAIVNFPTVRLKRRMPIWVKRVKDFELLC 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1102 340 PRINTS E-class P450 group I signature 242 266 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele39g1102 340 PRINTS E-class P450 group I signature 54 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele39g1102 340 PRINTS E-class P450 group I signature 274 284 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele39g1102 340 PRINTS E-class P450 group I signature 284 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele39g1102 340 PRINTS E-class P450 group I signature 165 182 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele39g1102 340 PANTHER CYTOCHROME P450 26 22 120 - -
Lele39g1102 340 Pfam Cytochrome P450 204 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele39g1102 340 Gene3D Cytochrome P450 14 334 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele39g1102 340 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 277 286 IPR017972 GO:0005506|GO:0016705
Lele39g1102 340 SUPERFAMILY Cytochrome P450 24 331 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1102 Lele-ChrLele39 19578512 19583599 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g1102 114 306 Cytochrome P450 AT3G13730 55.263 1.50e-82 256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g1102 39 19578512 19583599 Lele42g0922 42 21954674 21955960 CCT
Lele39g1102 39 19578512 19583599 Lele44g0435 44 3241874 3243458 CCT
Lele37g0321 37 2702766 2707857 Lele39g1102 39 19578512 19583599 hybridization