Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1098 ATGAATCGAGAACAGAACCGAGGGAAGCAAGAAAAAGATTCTGATGGTGCTGAGGTGGTCATTGTTGCCGTTAAGGCATCGAAGGAAATACCGAAGACTGCTCTTGTCTGGTCTCTAACTCATGTTGTTCAACCTGGGGATTGCATTATTTTGTTAGTGGTTTTGCCTACACAAAGCTCAGGTAGAAGGTTGTGGGTGTTTCCAAGATTTGCTGGTGACTGCGCCAGCGGTAGCAAGAAGTCTCCTCCTTCAGGAACAACTTCAGAGAAGAAGTGTGAGATCAATGATTCTTGTTCCCAGCTGATCCTTCGGCTTCAAGATGTCTATGATCCAAATAAGATAAATGTCAAGATTCAAACTGTATCTGGATCTCCTTGTGGAGGAGTAGCTGCAGAGGCCAAGAAAGTCCAGGCCAGTTGGGTTGTCTTAGACAAAGATCTCAAACATGAGGAAAAACGCTGTATTGAAGAATTGCAATGTAACATTGTAGCTATGAAGCGATCTCAACCAAAAGTTCTCCGCTTGAATTTGGTTGGATCACAAAAGAAGGATCTTGAAGAAGCCAGCCCATTACCTTGTGCGAAAGAAACACCAGGAAAACAAGCCAAACAGATGAACGAATCTTTAAACTCCATAAAAGCACCTGTTGTAACCCCAACTAGCAGCCCAGAGCAAGAGACGCCATTTACTGCGACTGAAGCTGGTACCTCATCAGTTTCGAGCTCAGATCCTGGGACCTCACCATTTTTTGTCTCAGAGATCAATGGTGAATTAAAGAAAGAGGAGACAATTAAGGAAAATGAAGAACTAGATACTAATTCAGATACAGACAGTGAAAATATGTCCGCATCCTCAGCAAGCATAAGATTCCAGCCTTGGATCTCAGAAATGCTTCTACATCAACGATCATCTCAACGTGCAGAAGAAAGATCTGAGAGATCTCATAATAGGCCCCAAATATCTACAACCAGAGCCTTGCTTGAAAAGCTCTCAAGGCTTGAGAGAGATTCTGGATTTGAAATTTCAACCTATAGAAGTGACTTGGATTTCAGTGGAAATGTAAGAGATGCAATAGCATTATCTAGAAATGCTCCTCCTGGTCCGCCTCCATTATGTTCAATATGTCAACATAAAGCACCAGTTTTCGGAAAACCTCCTAGGTGGTTTAGCTATGCTGAGTTGGAGCTTGCTACTGGGGGATTTTCACAAGCCAACTTCTTGGCGGAAGGAGGATTTGGATCTGTTCACAGAGGGGTTCTATCAGATGGGCAAGTCATTGCTGTCAAGCAACATAAATTGGCAAGTTCTCAGGGTGATCATGAGTTTTGCTCAGAGGTAGAAGTCTTAAGCTGTGCTCAGCATCGCAATGTTGTTATGCTGATTGGATTTTGTATAGAGGATAAGAGAAGGCTACTGGTTTATGAGTATATATGCAATGGATCGCTGGATTCTCATTTATACGGGAGACAGCGGGATGTATTAGAGTGGTCTGCTCGGCAAAAAATTGCTGTTGGAGCTGCTCGAGGGCTGCGATATCTTCATGAAGAGTGCAGAGTGGGTTGCATTATCCACCGGGACATGCGCCCAAACAATATTCTCATCACCCATGATTTTGAACCATTGGTTGGTGATTTTGGATTGGCAAGGTGGCAGCCTGATGGAGACACTGAAGTGGAAACTAGAGTCATTGGAACGTTTGGGTATTTGGCTCCAGAATATGCTCAAAGTGGCCAAATCACTGAAAAGGCTGATGTTTATTCCTTTGGAGTGGTATTAGTGGAGCTTGTTACTGGGCGAAAAGCTGTGGATCTCAATCGACCTAAAGGGCAGCAGTGTCTTACTGAATGGGCGCGGCCACTGTTAGAGGAATATGCCATTGAGGAACTGATTGATCCGAGGCTGGGAAATTGCTATTCGGAAAATGAGGTCTCTTGCATGCTGCATGCAGCTTCATTATGCATTCGTCGAGATCCTCATTCTAGACCTCGCATGTCACAGGTTCTCCGAATGCTCGAGGGCGACATGGTCATGGAGGCAAATTACCTAACAACTGCTGGTTATGATGCTGGGAACAGGAGTGGTCGGATCTGGGCAGAGCAGCAGATGCAGCATCATTACAGTGGTCCCCTGCCGGATGAGCCCCTGGAATCATCATTCAGTGGAAAGCTTTCTCTGGAGAAATACAGTTCTGCCTACTGGGAAAGGGACAAAGCCTAA 2217 0.4479 MNREQNRGKQEKDSDGAEVVIVAVKASKEIPKTALVWSLTHVVQPGDCIILLVVLPTQSSGRRLWVFPRFAGDCASGSKKSPPSGTTSEKKCEINDSCSQLILRLQDVYDPNKINVKIQTVSGSPCGGVAAEAKKVQASWVVLDKDLKHEEKRCIEELQCNIVAMKRSQPKVLRLNLVGSQKKDLEEASPLPCAKETPGKQAKQMNESLNSIKAPVVTPTSSPEQETPFTATEAGTSSVSSSDPGTSPFFVSEINGELKKEETIKENEELDTNSDTDSENMSASSASIRFQPWISEMLLHQRSSQRAEERSERSHNRPQISTTRALLEKLSRLERDSGFEISTYRSDLDFSGNVRDAIALSRNAPPGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLSDGQVIAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQRDVLEWSARQKIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTEVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIEELIDPRLGNCYSENEVSCMLHAASLCIRRDPHSRPRMSQVLRMLEGDMVMEANYLTTAGYDAGNRSGRIWAEQQMQHHYSGPLPDEPLESSFSGKLSLEKYSSAYWERDKA 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1098 738 MobiDBLite consensus disorder prediction 213 249 - -
Lele39g1098 738 FunFam Dual-specific kinase DSK1-like 11 166 - -
Lele39g1098 738 ProSiteProfiles Protein kinase domain profile. 401 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g1098 738 MobiDBLite consensus disorder prediction 300 323 - -
Lele39g1098 738 MobiDBLite consensus disorder prediction 255 271 - -
Lele39g1098 738 MobiDBLite consensus disorder prediction 213 285 - -
Lele39g1098 738 CDD STKc_IRAK 407 673 - -
Lele39g1098 738 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 477 680 - -
Lele39g1098 738 ProSitePatterns Tyrosine protein kinases specific active-site signature. 522 534 IPR008266 GO:0004672|GO:0006468
Lele39g1098 738 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 373 476 - -
Lele39g1098 738 MobiDBLite consensus disorder prediction 185 204 - -
Lele39g1098 738 MobiDBLite consensus disorder prediction 302 317 - -
Lele39g1098 738 Gene3D Transferase(Phosphotransferase) domain 1 477 684 - -
Lele39g1098 738 PANTHER OS01G0750732 PROTEIN 163 679 - -
Lele39g1098 738 Gene3D Phosphorylase Kinase; domain 1 373 476 - -
Lele39g1098 738 SUPERFAMILY Protein kinase-like (PK-like) 385 678 IPR011009 -
Lele39g1098 738 Pfam Protein kinase domain 405 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1098 Lele-ChrLele39 19557712 19561943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g1098 381 690 Trihelix Transcription Factor Family AT1G70460 52.500 1.14e-103 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Lele39g1098 Pkinase 4.6e-42 CL0016