Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1090 ATGGCCACAGTACCAGGGCAGCTCGTGTGGGAAATCGTGAAGAAGAACAACTCTTTTTTGGTGAAGGAGTTTGGTAGGGGGACTCAAAGCGTGCAGTTCAGTAAAGAGAGCAACAATCTCTACAACCTTAACTCTTTCAAGTTCTCTGGTTTGGCAAACAAGAAAACCATTAGTATTCAGCCTGCTGGCAAGGATCAATCTGTGCTGTTGGCAACGACCAAGACAAAGAAGCAGAACAAGCCAGCTTCATTGCTTCATAAGTCTGTCATGAAAAAGGAGTTCAGAATGATGGCAATGGCAGTGGAGAACCAGGTGGGAGATAACTACTACAGGCCTGATCTTAAGAAGGCGGCCCTTGCGAGGTTGAGTGCCATTCATAGGAGCCTCAAAGTTGCCAAGTCTGGTGTTCAAAAGAGGAACAGACAGGTTGTGAGGATTTCTGCCATGTCGGTAAAGAAATCTGCCTCTATGAACGGCGATGAGAAGGCCGCCGGAGCTGTTGACAAAGCCAGGAAACAACGGCGTTTCAACCGGTGGTTCTCGTTCGTGGAAGTATCTCTGGAGCCAGGGAAGCAGCTGAAGGACATGGATTCCAACAAGCTCAAGGCTGAGATCAGGAGGTGGGCCAAGGCTGTTGTGGCCTATGCCCGCCAAGTCAGCGGCCGGTTCGGAAGCTCCGGTGGCAAATCTCAGAGATAA 699 0.4979 MATVPGQLVWEIVKKNNSFLVKEFGRGTQSVQFSKESNNLYNLNSFKFSGLANKKTISIQPAGKDQSVLLATTKTKKQNKPASLLHKSVMKKEFRMMAMAVENQVGDNYYRPDLKKAALARLSAIHRSLKVAKSGVQKRNRQVVRISAMSVKKSASMNGDEKAAGAVDKARKQRRFNRWFSFVEVSLEPGKQLKDMDSNKLKAEIRRWAKAVVAYARQVSGRFGSSGGKSQR 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1090 232 Gene3D - 6 134 - -
Lele39g1090 232 PANTHER 60S RIBOSOMAL PROTEIN L28 1 145 IPR002672 GO:0003735|GO:0005840|GO:0006412
Lele39g1090 232 Pfam Ribosomal L28e protein family 8 128 IPR029004 -
Lele39g1090 232 FunFam 60S ribosomal protein L28 5 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1090 Lele-ChrLele39 19467044 19472800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g1090 1 142 Cytoplasmic Ribosomal Protein Gene Family AT4G29410 72.535 2.77e-72 215
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g1090 39 19467044 19472800 Lele39g1090 39 19467044 19472800 ECH
Lele37g0334 37 2814229 2816447 Lele39g1090 39 19467044 19472800 hybridization