Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1079 ATGGCTGGGGAATTCAGATGCAACTGGGTTTGGTTCTCTTTGTTATGGTTTGTCTCTGTATCAGTATTCTTAATTCAGGAAGTTGATAGGAAATCCATAGTTCTGCCTGAAGAGAAGAACTCTGCAAATCACAAACAGGGCAGAAGGAAATTAGATGATGTGGGAGGCTCCATTGAAATTGACTGTGGCCTGCTTGATGAGCATGGCTATACTGATGGCAGAACTGAGATACCCTACACTACGGATTCAAAATTCATCGATACTGGAGAAAACCGGGACATATCGATTGAGTTCAATTCCGAAAGTCTTGAAGGAATATTTAGAAATGTAAGAAGCTTTCCTGAGGGTAAGAGGAATTGTTACACTCTAAGGCATCCAGAAGGTAGAAATGCGGTTTACTTGTTGAGAGCTTCTTTCATGTATGGCAACTATGATGGTCTAAATCAGCCACCCAAGTTTGATCTTTATATTGGAGTTAATTTGTGGGACGCAGTGAGTTTCGACAACGGCTCGCATATTGTAATAAAGGAGATTTTACATGTGCCACCTATGGATGTTGTACATGTTTACATATTGAACACTGATAAAGGAACTCCTTTTATATCAGCATTGCAGATGACGCATCTTCACAATTCCATTTATACTAACAAATCTCGAACCTCGGCTCTATATAGACGTCTTGACTTTGGTTCAACAACTAATGAAATAGTAAGGTTTGAAGAAGATGCTTATGATAGAATTTGGTATCCTTACAATTTACCTAATTGTGAGTCATTAAGTACTAGCTTGACCATTGATTCCCTGAACACTGCGTATCGGCTACCATCAACCGTAATGAGAACTGCTGTAACACCAACTTATGGTAGCGACCCCCTAGAAGTTCAGTTTGACACTGGTGATCCTATTTCAAAGTTCTATGTTTATATGCACTTTGCTGAGATTAAGGAGCTCCAGGAAAATGAACACACAGAATTCAACATTACCTTGAATGGAAAATTGTTGGATGAGTCTGTAGATTATGTAGTCCTTAATTATTTAGACCCTACCACAATTCATAATCCTCAGCCCATCACAGGACCCAAGCTTTGGTTCTCTTTGAACAAGAAAGAAAATTCCACTCTTCCTCCAATTCTCAATGCAATGGAGATTTACTTTGAGAAAGATTCATATCAGGAACCTACAGACCAAGAAGATGTTAATGCTATCATGGACATCAAACATGCCTACACTATTAAGTCATGGCAAGGAGATCCTTGTGCACCAATGTACTATTCCTGGGATGGACTTAACTGCAGTTACAATGGATATAATGCACCAAGGATAATTGAATTAAATCTATCCTCCAGCAACTTGTCAGGAACAATAAGTCAATCGTTTTCAATGCTTAAATCTTTAGAATATTTGGATTTATCAAACAATAGATTAACAGGATCACTGCCTGGTTTTTTCATGCTTTTGCCACACTTGAAGACTCTAAATTTATCAGGAAACAGGCTCTCTGGTGAAATTCCATCGCCTCTCAGGGAAAGATCAAGTACTGGGTCACTTTTTTTGAGTGTGGATGGAAATCCTGATCTTTGCTTGAATCCTCCATGCAAAGTGGACAAGAGTACTTTTCTACTGCACTCAGTCATAGCCATTCTTTCATCCGCAGTCTTTTTAATCGTACTGGGTATTATAGTATACATTATTTGGAGAAGGAATTTTAGCCAAAATACAGCAAATCAGCCGGTGACATCGCGTGAGGAAGTTGTGCTGAAGTCAAGCAATACACAATTCACATATTCCCAGATAATAGATATTACCAATAACTTCGAGAAAATGATTGGGAAAGGAGGATCTGGAACTGTTTGTCATGGCTCCTTATCTGATGACACACAAGTTGCTGTCAAACTGCTCTCATCATCAGAAAGCTGCAAGCAGTTTCAGACAGAGGCAGAACTCTTAATGCGGGTTCATCATAGAAACTTGGCTTCCTTCCTTGGATATTGTAGTGACGGTGGACAAACTGCAATCATATATGAGTTCATGGCTAATGGGAACTTAGAGAAGTGTCTTTCAGGTTCAATGAAAGAATTATCGAGGTGGAAAAATAGGATTCAGATTGCAGTCGATGCTGCTCAAGGACTTGAGTATTTGCACCATGGCTGCAAACCTCCTATAGTTCACAGGGACATAAAGACATCAAATATTTTGCTGAATGAGAAAATGCAGGCAAAAGTTGCTGATTTTGGGTTCTCAAAGTCCTTTTCAACAGAAAGTGAAAGCCATATATCAACCGGAGTTGTTGGAACATTCGGATACCTTGATCCAGAATACTACTCATACTACAGGCTTACTGAGAAAAGTGATGTTTATAGTTTTGGCATTGTGCTTTTGGAGCTTATTACAGGGCAGAGAGCAATAATAACAGGTCAAGAGAACAATCACATTGTGAATTGGGTTACCCCTTTTGTGAAAAGAGGAGATCTGCAACAAATTGTGGATCCAAGGTTGCAGGGAGATTTTTATTTTGGTTCTATGTGGAAGGCTGTGGAAGCAGCAATAGATTGTGTCTCTCCAACCTCCATCCAAAGACCATCAATGAATTATATTGTCCCAGAATTGAAAGAAAGTTTAGAAATGGAAGCAGCTCGTCAACAAAAGTGGGCTAAAGATGGAAAAATGATGAAATCAGAAGTCTCATTCGACACCCATGTTGTTGATCTTGAAGCTGCCTCTGGTCCAGAAGCAAGATAG 2739 0.3936 MAGEFRCNWVWFSLLWFVSVSVFLIQEVDRKSIVLPEEKNSANHKQGRRKLDDVGGSIEIDCGLLDEHGYTDGRTEIPYTTDSKFIDTGENRDISIEFNSESLEGIFRNVRSFPEGKRNCYTLRHPEGRNAVYLLRASFMYGNYDGLNQPPKFDLYIGVNLWDAVSFDNGSHIVIKEILHVPPMDVVHVYILNTDKGTPFISALQMTHLHNSIYTNKSRTSALYRRLDFGSTTNEIVRFEEDAYDRIWYPYNLPNCESLSTSLTIDSLNTAYRLPSTVMRTAVTPTYGSDPLEVQFDTGDPISKFYVYMHFAEIKELQENEHTEFNITLNGKLLDESVDYVVLNYLDPTTIHNPQPITGPKLWFSLNKKENSTLPPILNAMEIYFEKDSYQEPTDQEDVNAIMDIKHAYTIKSWQGDPCAPMYYSWDGLNCSYNGYNAPRIIELNLSSSNLSGTISQSFSMLKSLEYLDLSNNRLTGSLPGFFMLLPHLKTLNLSGNRLSGEIPSPLRERSSTGSLFLSVDGNPDLCLNPPCKVDKSTFLLHSVIAILSSAVFLIVLGIIVYIIWRRNFSQNTANQPVTSREEVVLKSSNTQFTYSQIIDITNNFEKMIGKGGSGTVCHGSLSDDTQVAVKLLSSSESCKQFQTEAELLMRVHHRNLASFLGYCSDGGQTAIIYEFMANGNLEKCLSGSMKELSRWKNRIQIAVDAAQGLEYLHHGCKPPIVHRDIKTSNILLNEKMQAKVADFGFSKSFSTESESHISTGVVGTFGYLDPEYYSYYRLTEKSDVYSFGIVLLELITGQRAIITGQENNHIVNWVTPFVKRGDLQQIVDPRLQGDFYFGSMWKAVEAAIDCVSPTSIQRPSMNYIVPELKESLEMEAARQQKWAKDGKMMKSEVSFDTHVVDLEAASGPEAR 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1079 912 Pfam Malectin-like domain 60 384 IPR024788 -
Lele39g1079 912 SMART LRR_typ_2 462 485 IPR003591 -
Lele39g1079 912 SMART LRR_typ_2 486 514 IPR003591 -
Lele39g1079 912 PANTHER OS07G0107800 PROTEIN-RELATED 58 873 - -
Lele39g1079 912 ProSitePatterns Protein kinases ATP-binding region signature. 609 631 IPR017441 GO:0005524
Lele39g1079 912 SUPERFAMILY L domain-like 413 519 - -
Lele39g1079 912 SMART serkin_6 603 865 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g1079 912 ProSiteProfiles Leucine-rich repeat profile. 464 486 IPR001611 GO:0005515
Lele39g1079 912 Gene3D Transferase(Phosphotransferase) domain 1 677 898 - -
Lele39g1079 912 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 677 882 - -
Lele39g1079 912 Gene3D Ribonuclease Inhibitor 395 531 IPR032675 -
Lele39g1079 912 CDD STKc_IRAK 609 871 - -
Lele39g1079 912 Pfam Leucine rich repeat 443 499 IPR001611 GO:0005515
Lele39g1079 912 SUPERFAMILY Protein kinase-like (PK-like) 581 867 IPR011009 -
Lele39g1079 912 PRINTS Leucine-rich repeat signature 465 478 - -
Lele39g1079 912 PRINTS Leucine-rich repeat signature 486 499 - -
Lele39g1079 912 Pfam Protein tyrosine and serine/threonine kinase 605 815 IPR001245 GO:0004672|GO:0006468
Lele39g1079 912 Gene3D Phosphorylase Kinase; domain 1 575 676 - -
Lele39g1079 912 ProSiteProfiles Protein kinase domain profile. 603 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g1079 912 ProSitePatterns Serine/Threonine protein kinases active-site signature. 721 733 IPR008271 GO:0004672|GO:0006468
Lele39g1079 912 FunFam Leucine-rich repeat receptor-like kinase 397 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1079 Lele-ChrLele39 19390715 19396301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g1079 50 912 Receptor kinase-like Gene Family AT2G19210 45.040 0.0 752
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele39g1079 Malectin_like 3.3e-100 CL0202