Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele39g1072 | ATGAACTTTGTTCGAAATCCACATTTTAAAGTTCTTTATCTTCTTCTCTTTCTGATTCACCTTCATTCCCTGTGTTCCTACCCGACCCCCATGACATGTACGGACACGACCAGGGTTTGCACTTCCTTCTTGGCCTTCAAACCTCAACCAAACCAGACGCTAGCAGTTTTACAGAGTATGTTCGATGTACTTCCCAGTGATATTACGGTGGAAGGCAATGGCTGGGATTATGTGTTCATAAGGAAGAACTGTTCTTGCGCTTATGGCATAAAGAAATATGTATCCAACACTACTTTCACAGTGAAATCTAATGAAGGGCTTGTGCATGATTTGGTTATGGATGCCTATGATGGGCTTGTTATCTTGCCCAACACCACCAGGAGGGCCAGAAACGGCGCCGTCATATCACTGAGGTTGTTTTGTGGGTGTTCTAGTGGATTGTGGAACTATTTGTTAAGTTATGTCATGAGAGATGGGGATAGTGTTGAATCTTTGGCGAGTCGGTTTGGGGTTAGTATGGATAGTATTGAAACGGTGAATGGAATTACTAATCCAGATAATGTTACTGTGGGATCTCTTTATTATATACCTCTGGATTCAGCTCCGGGGGAGCCATATCCTTTGAAGAATGATACTCCTCCAGCACCTGTTCCTGCCCCATCTGCTGACAGTTTTATAGCTAATCAAGTCGATAATAAGGCTCATGTACCATACAAATGGATCATTGGTGGTTTAGGGGTTGTTCTTGCTCTAATCATACTAAGCATAATTCTCTGTGTTTCCCTGAGATCATCACATTGTTTCAATGAAGCTAGAAGAAGTCATGCAAAAGATACCGAGCCCAAGACCTTTCATAAGTTTCATATTCTTCGGAATTCAAGTTTTTGTTGTGGTTCAGAAAGGTACATAAGTGAAAAGTCTGTAGACCAGAAGCAAACTGATGGTGAACCCAGCAGCGTCCAGATTACCATTCCCAAAGTTCCAACTCTAGGGACTGATGTATTTGACATGGATAAGCCTGTGGTTTTCACATATGAAGAGATTTTCTCATCAACTGATGGCTTCTCTGATTCAAATCTACTTGGGCATGGTACATATGGTTCTGTTTACTATGGCCTGCTTCGTGACCAGGAAGTTGCTATAAAAAGAATGACGGCTACAAAATCTAAAGAATTTTTGTCTGAGATGAAAGTCTTGTGCAAGGTTCATCATGCAAATCTGGTAGAATTGAACGGCTATGCAGCCAGCCATGATGAACTTTTCCTTATTTACGAATATGCACTGAAGGGATCACTCAAAAGCCATTTACATGATCCTCAGAATAGGGGTCATTCCTCTCTTTCTTGGATCATGAGGGTCCAGATTGCACTTGATGCTGCTAGGGGCCTTGAATACATACATGAGCACACCAAAACCCATTACATCCATCGAGATATCAAAACAAGCAACATTTTACTCGACGCTTCCTTTAGAGCAAAGATTTCAGATTTTGGGTTAGCAAAACTTGTTGGAACGGCAAATGAGGGAGAAATTGCTACCACCAGAGTTATTGGTACATATGGTTATCTTGCTCCAGAATACTTGAGTGATGGCCTTGCAACATCCAAAAGTGATGTCTACGCATTTGGTGTTGTCCTCTTTGAGATTATATCTGGGAAGGAGGCGATCATTCGAACAGAAGGCACAATGACGAAAAACCCAGAAAGGCGTTCATTGGCATCTATTATGCTGGCTGCTCTTAGAAACACGCCCGATTCCTTGAGCATGTCAAACATGAGAGACTATATTGATCCCAACATGATGGATCTTTATCCTCACGATTGTGTATATAAGATGGCGATGCTGGCAAAGCAATGCGTGGACGATGATCCCATCGTACGACCTGATATGAAACAAGTTGTGATTTCCCTCTCACAGATTCTCTTGTCTTCTATTGAGTGGGAAGCAACTCTTGCCGGGAACAGTCAGGTTTTCAGTGGGCTTGTTCAAGGAAGATAG | 1998 | 0.4219 | MNFVRNPHFKVLYLLLFLIHLHSLCSYPTPMTCTDTTRVCTSFLAFKPQPNQTLAVLQSMFDVLPSDITVEGNGWDYVFIRKNCSCAYGIKKYVSNTTFTVKSNEGLVHDLVMDAYDGLVILPNTTRRARNGAVISLRLFCGCSSGLWNYLLSYVMRDGDSVESLASRFGVSMDSIETVNGITNPDNVTVGSLYYIPLDSAPGEPYPLKNDTPPAPVPAPSADSFIANQVDNKAHVPYKWIIGGLGVVLALIILSIILCVSLRSSHCFNEARRSHAKDTEPKTFHKFHILRNSSFCCGSERYISEKSVDQKQTDGEPSSVQITIPKVPTLGTDVFDMDKPVVFTYEEIFSSTDGFSDSNLLGHGTYGSVYYGLLRDQEVAIKRMTATKSKEFLSEMKVLCKVHHANLVELNGYAASHDELFLIYEYALKGSLKSHLHDPQNRGHSSLSWIMRVQIALDAARGLEYIHEHTKTHYIHRDIKTSNILLDASFRAKISDFGLAKLVGTANEGEIATTRVIGTYGYLAPEYLSDGLATSKSDVYAFGVVLFEIISGKEAIIRTEGTMTKNPERRSLASIMLAALRNTPDSLSMSNMRDYIDPNMMDLYPHDCVYKMAMLAKQCVDDDPIVRPDMKQVVISLSQILLSSIEWEATLAGNSQVFSGLVQGR | 665 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele39g1072 | 665 | ProSiteProfiles | LysM domain profile. | 152 | 196 | IPR018392 | - | |
Lele39g1072 | 665 | Pfam | Protein tyrosine and serine/threonine kinase | 359 | 635 | IPR001245 | GO:0004672|GO:0006468 | |
Lele39g1072 | 665 | SUPERFAMILY | Protein kinase-like (PK-like) | 334 | 637 | IPR011009 | - | |
Lele39g1072 | 665 | SMART | serkin_6 | 355 | 642 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lele39g1072 | 665 | FunFam | PTI1-like tyrosine-protein kinase 3 | 427 | 651 | - | - | |
Lele39g1072 | 665 | ProSitePatterns | Protein kinases ATP-binding region signature. | 361 | 382 | IPR017441 | GO:0005524 | |
Lele39g1072 | 665 | Gene3D | LysM domain | 149 | 204 | IPR036779 | - | |
Lele39g1072 | 665 | PANTHER | CHITIN ELICITOR RECEPTOR KINASE 1-RELATED | 76 | 659 | IPR044812 | GO:0019199|GO:0045087 | |
Lele39g1072 | 665 | SUPERFAMILY | LysM domain | 153 | 197 | IPR036779 | - | |
Lele39g1072 | 665 | CDD | LysM | 153 | 196 | IPR018392 | - | |
Lele39g1072 | 665 | FunFam | Kinase family protein | 330 | 426 | - | - | |
Lele39g1072 | 665 | Pfam | LysM domain | 154 | 191 | IPR018392 | - | |
Lele39g1072 | 665 | ProSiteProfiles | Protein kinase domain profile. | 355 | 642 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lele39g1072 | 665 | Gene3D | Transferase(Phosphotransferase) domain 1 | 428 | 651 | - | - | |
Lele39g1072 | 665 | SMART | LysM_2 | 153 | 197 | IPR018392 | - | |
Lele39g1072 | 665 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 474 | 486 | IPR008271 | GO:0004672|GO:0006468 | |
Lele39g1072 | 665 | Gene3D | Phosphorylase Kinase; domain 1 | 329 | 426 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele39g1072 | Lele-ChrLele39 | 19312165 | 19317982 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele39g1072 | 30 | 665 | Receptor kinase-like Gene Family | AT1G51940 | 67.391 | 0.0 | 835 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LysM | Lele39g1072 | PK_Tyr_Ser-Thr | 4.4e-49 | CL0016 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele37g0354 | 37 | 2964033 | 2969689 | Lele39g1072 | 39 | 19312165 | 19317982 | hybridization |