Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1059 ATGGCACCCCACAACATATCAAAGTGCAGCAACAACCTTCAAAGAACGGTGTCGGACATATCCTACGACATCTCGAAAGAAGAAATAATCCAAGATGTGAAGGCACTGCCGGTGATATCAGAGGTTGAAGACGCCAAGTGTGAGTGCTGTGGGATGAGCGAGGAGTGCACGACGGAGTACATAGAGCGCGTGAGGGAAAAGTATTTGGGGAAGTGGGTGTGTGGGCTGTGTGCTGAAGCAGTGAAGGAAGAGCTTGAGAAGAATGGAGGGATGAAAGAGGAAGCCCTAAACGCACACATGAGCGCGTGTGTTAAGTTCAACAAGTATGGTAGGGCTTTTCCTGTTCTGGTTCAAGCTCAAGCCATGAAGGAGATGTTGAAGAAGAGCAATAAGTTTGATGGAAGACGAGTCAGGTCCTTTAACCCAAGACACTCCGACAATGATAAGAAAGGAGGCCTGGCAAGGAGTTCAAGTTGCATTCCTCAGCTATGA 492 0.4817 MAPHNISKCSNNLQRTVSDISYDISKEEIIQDVKALPVISEVEDAKCECCGMSEECTTEYIERVREKYLGKWVCGLCAEAVKEELEKNGGMKEEALNAHMSACVKFNKYGRAFPVLVQAQAMKEMLKKSNKFDGRRVRSFNPRHSDNDKKGGLARSSSCIPQL 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1059 163 MobiDBLite consensus disorder prediction 137 151 - -
Lele39g1059 163 Pfam Protein of unknown function (DUF1677) 42 128 IPR012876 -
Lele39g1059 163 MobiDBLite consensus disorder prediction 137 163 - -
Lele39g1059 163 PANTHER OS01G0745000 PROTEIN 35 162 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1059 Lele-ChrLele39 19202897 19203388 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0915 41 18644887 18654110 Lele39g1059 39 19202897 19203388 CCT
Lele42g0895 42 21701590 21710379 Lele39g1059 39 19202897 19203388 CCT
Lele39g1059 39 19202897 19203388 Lele39g1059 39 19202897 19203388 ECH
Lele37g0368 37 3094571 3095062 Lele39g1059 39 19202897 19203388 hybridization
Lele38g0345 38 2800898 2801386 Lele39g1059 39 19202897 19203388 hybridization