Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1043 ATGGGTGGGAACCCTAATTTGTGGAGCAATATGCATGACGCTGCTTATGTTGTTGGATCTTCCATTCCTTTCAATTCGCTGATCCCTCAAAACCCAGATCAGCCTCCAGCTCCTTCAAGCTGGAGCCAGCTCCTCTTCTCAGGAGCACCGGGAGAAGAACAGAGAATGAGTTATGATCACTTTCAAGCAAAGAAGTTGGGAACTTGGGGAGAACAAGTTCTGAATAATCCATCCTTGTCCAGAGTTCATCTTGTTGAAGGATTAATAAAGCAAGAGGCTTGCTTGTACGGCCATGGTGAGGAATTTCAGGGAACTTCTTCATCAGCAGCTAATTGGTCACACATGGTGGTCCCTGCTGTTTCTTCTTCCCCTAGGTCGTCTTGCGTCACTAGCTTCAGTGGTAGTCATACTTATAACAACAACAACACTGTTATGGATTCTTTCTCTTATAACAAGGCCCACACTAAGAAAACTCATCTTCCTGCTGCAGATCACTCATTTGAGTGCAGCACAGCCACTGGTGGAATCTGTAAGAAGGCTAGGGTTCAAGCATCTTCAAGCCAGCCGCCTCTCAAGGTGAGGAAGGAGAAATTAGGAGATAGAATATCAGCCCTTCACCAACTAGTTTCTCCTTTTGGGAAGACTGACACAGCTTCAGTATTGTTAGAAGGCATTGGATATATCAGATTCCTTCATGGTCAAATTGAGGCTCTCTGCTTTCCTTATTTCGGAAATTCATCAAAAAACCTGAGGAACCATCACTTTGTGAATCAGGGGGAGAGGAATTCTGTATTCCCAGAGGACCCTGGACAGCTGTTGAATAATGACTCTTCCCTCAAAAGAAATGGAGCTCCAAACCAGGAAAATGGAGAAGAAAAGGCAAAGGACTTGAGGAGCAAGGGGTTATGCTTGGCGCCAATGTCTCTGAGCCACCATTTGGGAAGTGATCATAATAATATTGGGGCTGATTTTTGGTCATCCACTTATGCCACCGGTTTTTAA 1002 0.4481 MGGNPNLWSNMHDAAYVVGSSIPFNSLIPQNPDQPPAPSSWSQLLFSGAPGEEQRMSYDHFQAKKLGTWGEQVLNNPSLSRVHLVEGLIKQEACLYGHGEEFQGTSSSAANWSHMVVPAVSSSPRSSCVTSFSGSHTYNNNNTVMDSFSYNKAHTKKTHLPAADHSFECSTATGGICKKARVQASSSQPPLKVRKEKLGDRISALHQLVSPFGKTDTASVLLEGIGYIRFLHGQIEALCFPYFGNSSKNLRNHHFVNQGERNSVFPEDPGQLLNNDSSLKRNGAPNQENGEEKAKDLRSKGLCLAPMSLSHHLGSDHNNIGADFWSSTYATGF 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1043 333 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 74 311 - -
Lele39g1043 333 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 192 242 IPR036638 GO:0046983
Lele39g1043 333 MobiDBLite consensus disorder prediction 268 285 - -
Lele39g1043 333 CDD bHLH_AtbHLH_like 192 238 IPR045239 -
Lele39g1043 333 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 182 231 IPR011598 GO:0046983
Lele39g1043 333 MobiDBLite consensus disorder prediction 261 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1043 Lele-ChrLele39 19072886 19076026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g1043 51 272 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 44.309 8.97e-39 139
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g1043 39 19072886 19076026 Lele39g1043 39 19072886 19076026 ECH
Lele37g0385 37 3223929 3227100 Lele39g1043 39 19072886 19076026 hybridization
Lele38g0363 38 2960094 2964568 Lele39g1043 39 19072886 19076026 hybridization