Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1037 ATGGGAGGCTTAAGCCTGTTGGCGATAAAATTATGTACTTTTAATTTAATAATCCATTACACGTTCGTGCGAAATGTTGTTCATCCTGTGCGATTCTTAAGACTGGGTGCTAATTTCATGCTCGCAAGCTGCCTTTCGCTGCCTTTGGTGATGGGGAGTGAGGTGGATGCAGTGAAGGAGGCCCAAATAGTGGATGCCCGTGCAAGAAACATCAGTCACAATGTGAGGTGCACAGAATGTGGGAGTCAATCCATTGAAGATTCTCAAGCAGACATTGCGATTCTACTTAGAAAGTTAATTCGGGATGAGATTCGCAGTGGGAAGACAGACAAGGAGATATACAACAAGCTTGAGGATGAATATGGAGAGACTGTACTCTATGCACCTAAGTTTGATTTGCAGACTGCAGCTTTATGGCTATGCCCACTTCTAGTTGCAGGTGCAGCAGCTGGAGTATGGGCTTACAACAGGCATAAGAAGAAGACTAATGTTCATATCATGGCTTTGAACCTTATCAGAGGTGTTCCATTGACCACAAAAGAAAGGCAAACCATGCTTGATCTCCTTACACCACCTCCATCACAGAATCCAAGAACTCCCTTCTGGTGGAGGAGATGGCGAGTAGTATTTTATGTTAGCGTTCCAAGCAAATGGAAGCTGTGCTATAGGTCGGTGGCCGATCCTTTGTCCACATCACCTTCTGAATTCATGGAGGTGGTGACAGAATTTGCTAAACATGGCCTTGCAGCTCATGACAGTGTTGCCATTAGAGCAGATCAAAAGAGTTACAGTTACAAGCAGCTCATATCTTCTGCACAGGAGATATCAAATCTCTTATGTGGAAATGACATGACTTCAGGAAATGTTGGTGGAGCTCGAATAGGAATTGTAGCCAAACCCTCTGCTGAGTTTGTTGCAGCAATGCTAGGGACTTGGCTTAGTGGAGGTGTTGCCGTGCCACTTGCACTGAGCTATCCAGAAACAGAGCTATTGTATGTGATGAACAATGCTGTAAGCTCTGAAGACGTGTCTGCCATTTTGAGTACTGAGGATCATAGTCAAACAATGCAAAATGTTGCCAATAAAAGCTCTTCTCAGTTCTTTGTTATTCCTCCTGTTCCCAATGAATTCTCGAAGAAGAGCAGAGATGAAGATTCACAGAATAAAGAAATGCTGGAAGAAAGAATTCATCAGGGGAATATCAAAAGAACAAGTGAAGATCCAGCATTGATATTGTACACTAGTGGTACAACAGGTAAACCTAAGGGAGCTGTTCACACACATCGAAGTATCAGCGCACAGGTTGACTTTATGCTCAAATTTAGCGTGAGCGGAATTTGGCAGAGATGGCGTGAGTCCTATCCAGTTGAAGGAACTAAGGCTGAGGACGCTATAACTGTATTGATACAAGGTTACCAAGCAATGGACCCTGAGTCACAAGCCGCTTCAGCTGCTGCTGCAAGGAACTTGCGTCTTATGATGTGTGGGTCCTCTGCACTTCCTCAACCTGTTATGCAAGAATGGGAAGCCATCACCGGCCATCGGCTGTTAGAGCGATATGGCATGACTGAAGTAAGTATCCGGTGGTTTGGGAAATTATTTGTGGATATTCTGGAGTTTGTCATGGCAATATCAAATCCCTTGAAAGGTGAGCGGAAGGCAGGCACTGTTGGCAAACCTTTTCATGGCGTGCAGGTTAAGATTCTTGCAGATGAGGAGAGTGGAAGTAATGTAAATAAAGTGGGCGAGCTTTGCGTTAAAAGCCCATTGTTGTTTAAAGAATATTGGAAACTTCCTGAGGTAACAAAGGAATCATTCATTGACGATGGCTTCTTCAAAACTGGAGATGCAGTTACGATAGATGAAGATGGATATTACATCATTTTAGGACCTGTGTCAGAATGTTGCGTGTTGGGCTTACCAGACAAAGATTATGGAGTAGTTTGTGCAATTATTGTGGCAGAGGCTGAGACTAAGAAAAAGAGAGAGGAAGAGTCAAAACCTGCTTTAACCTTAGAAGAATTGTCTTCTTGGGCCAAAGACAGGCTTGCACCTTACAAGATACCTACTCGATTGTTCCATTGGGACTCTCTTCCTCGTAATGCAATGGGGAAGGTGAACAAAAAAGAGTTGAAGAAATTGCTGTCTCCGGAGCAGTAA 2160 0.4375 MGGLSLLAIKLCTFNLIIHYTFVRNVVHPVRFLRLGANFMLASCLSLPLVMGSEVDAVKEAQIVDARARNISHNVRCTECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKEIYNKLEDEYGETVLYAPKFDLQTAALWLCPLLVAGAAAGVWAYNRHKKKTNVHIMALNLIRGVPLTTKERQTMLDLLTPPPSQNPRTPFWWRRWRVVFYVSVPSKWKLCYRSVADPLSTSPSEFMEVVTEFAKHGLAAHDSVAIRADQKSYSYKQLISSAQEISNLLCGNDMTSGNVGGARIGIVAKPSAEFVAAMLGTWLSGGVAVPLALSYPETELLYVMNNAVSSEDVSAILSTEDHSQTMQNVANKSSSQFFVIPPVPNEFSKKSRDEDSQNKEMLEERIHQGNIKRTSEDPALILYTSGTTGKPKGAVHTHRSISAQVDFMLKFSVSGIWQRWRESYPVEGTKAEDAITVLIQGYQAMDPESQAASAAAARNLRLMMCGSSALPQPVMQEWEAITGHRLLERYGMTEVSIRWFGKLFVDILEFVMAISNPLKGERKAGTVGKPFHGVQVKILADEESGSNVNKVGELCVKSPLLFKEYWKLPEVTKESFIDDGFFKTGDAVTIDEDGYYIILGPVSECCVLGLPDKDYGVVCAIIVAEAETKKKREEESKPALTLEELSSWAKDRLAPYKIPTRLFHWDSLPRNAMGKVNKKELKKLLSPEQ 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1037 719 Pfam AMP-binding enzyme C-terminal domain 631 705 IPR025110 -
Lele39g1037 719 Pfam Cytochrome C biogenesis protein 46 187 IPR005616 -
Lele39g1037 719 ProSitePatterns Putative AMP-binding domain signature. 411 422 IPR020845 -
Lele39g1037 719 Gene3D - 463 629 IPR042099 -
Lele39g1037 719 Gene3D - 220 452 IPR042099 -
Lele39g1037 719 Pfam AMP-binding enzyme 481 630 IPR000873 -
Lele39g1037 719 Pfam AMP-binding enzyme 251 438 IPR000873 -
Lele39g1037 719 Gene3D - 630 719 IPR045851 -
Lele39g1037 719 PANTHER ACYL-COA SYNTHETASE 234 438 - -
Lele39g1037 719 CDD CcmH_N 64 129 - -
Lele39g1037 719 SUPERFAMILY Acetyl-CoA synthetase-like 197 716 - -
Lele39g1037 719 Gene3D Cytochrome C biogenesis protein 53 132 IPR038297 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1037 Lele-ChrLele39 19031936 19043467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g1037 390 714 Monolignol Biosynthesis Gene Families AT1G20500 24.422 6.80e-19 89.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g1037 39 19031936 19043467 Lele39g1037 39 19031936 19043467 ECH
Lele38g0370 38 2997987 3004407 Lele39g1037 39 19031936 19043467 hybridization