Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1015 ATGGCCTCTTTTGCGTATGCCTTGTGCGATTGGCGCAATATACAATCGATAGAAATTCGCGAAAGGCAATTGTGGGAGAGGGGGGGAAAAGCCAAGCCTTTGAAGAAGCCCAAGTCCGATCAGAAAGATTACGACGAGGTTGATTTGGCTAACCTTCAGAAGAAAAAGGAAGAGGAAAAGGCACTAAAGGAGCTGAAAGCCAAGGCGCAACAGAAGGGGGCCCTGGGAGATTTGGACTGCCGGACTACCTCTCATGAAAGGGGATGTTGCACTACATTCCGACGAAATAGGAGCCGTTTCTTTGCTCTTTTTTCGGCCTATCACTCACAAATATCTTTCTTTTCCCCTGTTTCTCTACGTCTCTCTGTAATCCGTCTTTGGGTCTCCATAGAAAGTGGGGATGATAAGGATTTGGTTCAAAGATTGATTATGAGAGAAAATTTGAGGGAATTTGTGGCAGAAGGGGTAGGGGGTGTGACTGGAGTGATCTGTGGTTATCCACTAGACACCCTCCGAATCCACCAACAGAATTCAAATACGGCAACTTCTGTGCTGAGCTTAATAAAAAATGTGGTTTCCAAGGAAGGACCAGCTTCTCTTTACAGAGGCATGGTAGCACCTTTGGCTGCGATTACTTTTCATAATGCTATGATTTTTCAAACTTACGCTGCTCTCTCAAGAGCCTTTGACTCATCAGTACCAAACAAGCCTCCTTCCTACAACAGCGTTGCTCTAGCAGGATTCATAACTGGTGCTTTACAAAGCACGATTGTGTCCCCAGTAGAACTGGTCAAAATTCGCCTCCAGCTTCAGAGCAAGGGCAATTAA 828 0.4565 MASFAYALCDWRNIQSIEIRERQLWERGGKAKPLKKPKSDQKDYDEVDLANLQKKKEEEKALKELKAKAQQKGALGDLDCRTTSHERGCCTTFRRNRSRFFALFSAYHSQISFFSPVSLRLSVIRLWVSIESGDDKDLVQRLIMRENLREFVAEGVGGVTGVICGYPLDTLRIHQQNSNTATSVLSLIKNVVSKEGPASLYRGMVAPLAAITFHNAMIFQTYAALSRAFDSSVPNKPPSYNSVALAGFITGALQSTIVSPVELVKIRLQLQSKGN 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1015 275 Pfam Translation machinery associated TMA7 27 76 IPR015157 -
Lele39g1015 275 ProSiteProfiles Solute carrier (Solcar) repeat profile. 145 228 IPR018108 -
Lele39g1015 275 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 146 272 - -
Lele39g1015 275 ProSiteProfiles Solute carrier (Solcar) repeat profile. 238 275 IPR018108 -
Lele39g1015 275 SUPERFAMILY Mitochondrial carrier 147 274 IPR023395 -
Lele39g1015 275 Coils Coil 49 75 - -
Lele39g1015 275 Gene3D Mitochondrial carrier domain 53 275 IPR023395 -
Lele39g1015 275 Pfam Mitochondrial carrier protein 243 274 IPR018108 -
Lele39g1015 275 Pfam Mitochondrial carrier protein 148 229 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1015 Lele-ChrLele39 18860814 18864776 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g1015 165 271 Antiporters AT1G79900 62.963 2.49e-42 145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g1015 39 18860814 18864776 Lele41g0841 41 18120074 18124021 CCT
Lele39g1015 39 18860814 18864776 Lele42g0830 42 21215752 21219719 CCT
Lele39g1015 39 18860814 18864776 Lele43g0552 43 4977148 4981068 CCT
Lele39g1015 39 18860814 18864776 Lele44g0515 44 3961532 3964636 CCT
Lele39g1015 39 18860814 18864776 Lele39g1015 39 18860814 18864776 ECH
Lele37g0419 37 3463329 3474305 Lele39g1015 39 18860814 18864776 hybridization
Lele38g0388 38 3143368 3148918 Lele39g1015 39 18860814 18864776 hybridization