Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0997 ATGAGTGTGGTCGGTTTTGACTTCGGTAATGAGAGCTGTATTGTTGCTGTTGCAAGGCAGAGAGGGATTGATGTCGTGCTTAATGATGAGTCCAAACGAGAAACTCCGGCAGTTGTGTGTTTTGGTGACAAACAACGGTTTATTGGAACAGCTGGGGCTGCATCTACTATGATGAACCCAAAGAATTCAATCTCACAGATCAAGCGTCTAATTGGTAGGCAATTCTCTGATCCCGAGTTGCAGCGGGATCTAAAGTCATTGCCTTTTATGGTAACTGAAGGGCCTGATGGCTATCCATTAATTCATGCACGGTATTTGGGTGAAGTTAAAACATTTACACCAACACAAGTGTTGGGAATGGTGTTGTCAGATCTCAAAGGTATAGCTGAGAAGAATCTGAATGCAGCTGTTGTTGATTGTTGCATTGGAATTCCGGTTTATTTCACTGATCTTCAGAGAAGGGCAGTCTTGGACGCAGCTACCATTGCGGGTTTGCACCCACTACGCCTGATTCATGAAACGACAGCAACTGCCTTGGCGTATGGAATTTATAAGACTGATCTCCCTGAAAATGATCAACTGAATGTTGCATTTGTGGATGTTGGACATGCCAGCATGCAAGTGTGCATTGCTGGCTTTAAGAAGGGGCAGCTGAAAGTATTGGCTCATTCATTTGATAGATCTCTAGGTGGTAGGGATTTTGATGAAGTTTTGTTCCATCACTTTGCTGCAAAGTTCAAGGAAGAGTACAAGATTGATGTTTTCCAGAATGCCAAGGCTTGTCTAAGGCTGAGAGCTGGTTGTGAGAAGCTGAAGAAGGTGCTCAGTGCAAATCCTGAAGCACCTCTTAACATTGAATGCTTAATGGACGAGAAAGATGTTAGGGGTTTCATCAAGCGTGATGAATTTGAGCAATTAAGTGTTCCAATATTGGAACGAGTTAAAAAACCTTTGGAAAAGGCTCTTGCAGAAGCAGGTCTTACGGTTGAGAATGTACATATGGTTGAGGTAATTGGTTCAGCTTCTCGTATACCAGCTATATACAAGATATTGACAGATTTTTTCAAGAAGGAGCCTAGGCGGACAATGAATGCAAGTGAGTGCATTGCCAAGGGTTGTGCCTTGCAATGTGCTATTCTTAGTCCAACATTTAAAGTACGAGAGTTTCAGGTCAATGAAAGCTTTCCTTTCCCAATTTCTCTGTCATGGCAAGGTTCTGGTCCAGATCTACAGGAGAGTGGACCAGATAATCAGATGGGCACTGTTGTTTTCCCTAAAGGAAATGTCATACCAAGCATCAAGGCTCTGACATTCTATAGGTTGGAAACATTTTCTGTTGATGTACGGTATGCTGATGTGAGTGATCTGCACACACCTCCAAAGATCAGCACATATACTATTGGTCCTTTGCCAACTATGAAAGTTGAGAAGTCAAAAATTAAAGTGAAAGTAAGATTGAATCTGCATGGAATTGTATCTGTTGAATCGGCGACGCTTCTGGAGGAGGAGGAAGTTGAGGTTCCAGTGGCCAAAGTTCCAGCTGGAGAAAGTGCCAAGATGGACACTGATGAAGTTCCTGCTGAGGCTGCAGCAGATGCTGCTGCTGCTGCTGCTGCTCCTCCAAGCTCCAATGATGCTGATGTTGATATGCAAGATGCTAAGGCAACTGTTGACACCCCTGGGATGGAAAATGGCAATGCTGAGACTGGGGATAAGCCTGTGCAGATGGATTCAGATACCAAGGTTGAGGCTCCAAAGAAAAAGGTCAGGAAAACAAACATACATTTGACAGAGTTGGTATATGGAGCAATGAGTCGTTCAGATGTCCAAAAAGCTGTAGAGAAGGAGTTTGAAATGGCTTTGCAAGATCGAGTGATGGAAGAAACAAAAGAAAAGAAGAATGCTGTTGAGGCTTATGTTTATGACATGAGGAATAAGCTCAGTGACAAATACCACCAGTTCGTCACTGATTCAGAGAGAGAGGCACTTACTGCTAGACTTCAGGAGGTGGAAGACTGGTTATATGAAGATGGTGAGGATGAAACTAAAGGTGTTTATGTTGCCAAACTTGAGGAACTTAAGAAGCAAGGTGATCCAATTGAGGAGCGTTACAAGGAATACATGGAGAGGGATACAATAATCAATCAGTTCATCTATTGTATAAATAGCTACAGGGAAGCGGCAATGTCAAACGATCCCAAATTTGATCACATTGACATTTCTGAGAAGCAGAAGGTCCTGAATGAATGTGTTGAAGCTGAGGCTTGGTTTAAGGAGAAGAAGCAGCAGCAGGACTCTCTTCCAAAACATGCCAACCCTGTACTCTTGTCGGCTGAAGTAAGAAAGAAAGCCGAGGCAGTCGATAGGTTCTGTAAGCCAATTATGACAAAACCAAGGCCAGCCAAGCCAGCAACCCCTGAAGCGACACCAGCTCCGACAGCAACGCCACCGCCTCCTCAGGATGGTGAGCACCAGCAACAACCTCAGGGAGATGCCAATGCAAGCGACAATGCAGACCAGGCGCCCCCACCAGCGTCAACTGAACCAATGGAGACTGATAAGTCAGAAAACTCAGGCGCTGCATAA 2586 0.4428 MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAVVCFGDKQRFIGTAGAASTMMNPKNSISQIKRLIGRQFSDPELQRDLKSLPFMVTEGPDGYPLIHARYLGEVKTFTPTQVLGMVLSDLKGIAEKNLNAAVVDCCIGIPVYFTDLQRRAVLDAATIAGLHPLRLIHETTATALAYGIYKTDLPENDQLNVAFVDVGHASMQVCIAGFKKGQLKVLAHSFDRSLGGRDFDEVLFHHFAAKFKEEYKIDVFQNAKACLRLRAGCEKLKKVLSANPEAPLNIECLMDEKDVRGFIKRDEFEQLSVPILERVKKPLEKALAEAGLTVENVHMVEVIGSASRIPAIYKILTDFFKKEPRRTMNASECIAKGCALQCAILSPTFKVREFQVNESFPFPISLSWQGSGPDLQESGPDNQMGTVVFPKGNVIPSIKALTFYRLETFSVDVRYADVSDLHTPPKISTYTIGPLPTMKVEKSKIKVKVRLNLHGIVSVESATLLEEEEVEVPVAKVPAGESAKMDTDEVPAEAAADAAAAAAAPPSSNDADVDMQDAKATVDTPGMENGNAETGDKPVQMDSDTKVEAPKKKVRKTNIHLTELVYGAMSRSDVQKAVEKEFEMALQDRVMEETKEKKNAVEAYVYDMRNKLSDKYHQFVTDSEREALTARLQEVEDWLYEDGEDETKGVYVAKLEELKKQGDPIEERYKEYMERDTIINQFIYCINSYREAAMSNDPKFDHIDISEKQKVLNECVEAEAWFKEKKQQQDSLPKHANPVLLSAEVRKKAEAVDRFCKPIMTKPRPAKPATPEATPAPTATPPPPQDGEHQQQPQGDANASDNADQAPPPASTEPMETDKSENSGAA 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0997 861 CDD HSPA4_like_NDB 2 381 - -
Lele39g0997 861 FunFam Heat shock 70 kDa protein 4 1 78 - -
Lele39g0997 861 Gene3D - 5 374 - -
Lele39g0997 861 MobiDBLite consensus disorder prediction 791 861 - -
Lele39g0997 861 MobiDBLite consensus disorder prediction 824 842 - -
Lele39g0997 861 FunFam Heat shock 70 kDa protein 4 38 113 - -
Lele39g0997 861 Gene3D Actin; Chain A, domain 4 230 313 - -
Lele39g0997 861 Gene3D - 604 714 IPR029048 -
Lele39g0997 861 Gene3D - 186 360 - -
Lele39g0997 861 FunFam Heat shock 70 kDa protein 4 110 212 - -
Lele39g0997 861 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 637 IPR029047 -
Lele39g0997 861 FunFam Heat shock 70 kDa protein 4 604 714 - -
Lele39g0997 861 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Lele39g0997 861 MobiDBLite consensus disorder prediction 799 823 - -
Lele39g0997 861 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 717 802 IPR029048 -
Lele39g0997 861 Coils Coil 690 710 - -
Lele39g0997 861 Gene3D - 38 113 - -
Lele39g0997 861 PANTHER HSC70CB, ISOFORM G-RELATED 1 853 - -
Lele39g0997 861 FunFam Heat shock 70 kDa protein 4 230 313 - -
Lele39g0997 861 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 601 IPR029047 -
Lele39g0997 861 MobiDBLite consensus disorder prediction 516 586 - -
Lele39g0997 861 Pfam Hsp70 protein 3 705 IPR013126 GO:0005524|GO:0140662
Lele39g0997 861 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 606 704 IPR029048 -
Lele39g0997 861 PRINTS 70kDa heat shock protein signature 140 160 - -
Lele39g0997 861 PRINTS 70kDa heat shock protein signature 477 493 - -
Lele39g0997 861 PRINTS 70kDa heat shock protein signature 2 15 - -
Lele39g0997 861 PRINTS 70kDa heat shock protein signature 30 42 - -
Lele39g0997 861 PRINTS 70kDa heat shock protein signature 363 383 - -
Lele39g0997 861 PRINTS 70kDa heat shock protein signature 332 348 - -
Lele39g0997 861 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0997 Lele-ChrLele39 18760065 18775023 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0997 4 438 Calmodulin-binding Proteins AT1G16030 35.388 1.21e-85 285